Gene
| Gene Model ID | pfu_aug2.0_38.1_26716 |
|---|---|
| Locus | scaffold38.1 : 354396 ... 355499 : - |
| To GenomeBrowser | scaffold38.1:354396..355499 |
| Genes list of scaffold | scaffold38.1 |
| Synonym | pfu_aug1.0_5215.1_45146 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_38.1_26716.t1 | 1 | 1 | TatD_DNase | 5 | 263 | 0.0 | 165.9 | 0.0 | 0.0 | 165.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_38.1_26716.t1 | gi|573910622|ref|XP_006643029.1| | PREDICTED: putative deoxyribonuclease TATDN3-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_38.1_26716.t1 | gi|528505522|ref|XP_005158628.1| | PREDICTED: tatD DNase domain containing 3-like isoform X1 [Danio rerio] | 0.0 |
| pfu_aug2.0_38.1_26716.t1 | gi|729755858|ref|XP_010574708.1| | PREDICTED: putative deoxyribonuclease TATDN3 [Haliaeetus leucocephalus] | 0.0 |
| pfu_aug2.0_38.1_26716.t1 | gi|632973556|ref|XP_007903211.1| | PREDICTED: putative deoxyribonuclease TATDN3 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_38.1_26716.t1 | gi|532010255|ref|XP_005348928.1| | PREDICTED: putative deoxyribonuclease TATDN3 isoform X2 [Microtus ochrogaster] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_38.1_26716.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_38.1_26716.t1 atgtccctttatgtagactgtcataatcatttagcagatgatatcttcgggacggacatagctgatgtaattcgcggtgc tcagagtgctggagtgacggcatcacttgtgtgtgctgagtttgtgaaagactttcagagaatactccatttacacagtg agtttcctgagtttatagccccgtgtctaggggttcatccagttcaacgagagaaagatgataagagtaaggaaatttcc gcaaacctagaacatttgatccctgccgaacctctgatgatgtccaatgtcaacttgatgtttgctgtcggagaaatagg actggacttccaaccgaggatagctccaaattctgactacagagacattcaaagggaagtgctccgaagacaagtcaagt ttgccatggaaaacgatctacccgtgaacgttcattcacggtcagcaggaaaaccaacaatacagactctgaaagagtgc aacacaaagaacgttcttttgcatgcgttcgacgggaaaccatcagcggccatggagggcatcaaagaaggatatttctt ttccattcctccctctattgtgcggagtgaacagaagcaaaaactggtaaagactatacctctagatcatatactgttag aaacagacagtccagctcttggtccagacagggagaacagaaatgtgccggaaaacattaggatatcgtgtgaagaaata gctagaattaaaaacatatcaataaaggatgtccaggatatgacatttagtaattcacttaaactatttcccaaactttc aggtattacaaatgttattgaaactgaataa |
|
Protein
| Protein ID | pfu_aug2.0_38.1_26716.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_38.1_26716.t1 MSLYVDCHNHLADDIFGTDIADVIRGAQSAGVTASLVCAEFVKDFQRILHLHSEFPEFIAPCLGVHPVQREKDDKSKEIS ANLEHLIPAEPLMMSNVNLMFAVGEIGLDFQPRIAPNSDYRDIQREVLRRQVKFAMENDLPVNVHSRSAGKPTIQTLKEC NTKNVLLHAFDGKPSAAMEGIKEGYFFSIPPSIVRSEQKQKLVKTIPLDHILLETDSPALGPDRENRNVPENIRISCEEI ARIKNISIKDVQDMTFSNSLKLFPKLSGITNVIETE |
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