Gene
| Gene Model ID | pfu_aug2.0_38.1_26721 |
|---|---|
| Locus | scaffold38.1 : 488158 ... 489119 : - |
| To GenomeBrowser | scaffold38.1:488158..489119 |
| Genes list of scaffold | scaffold38.1 |
| Synonym | pfu_aug1.0_231282.1_72146 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_38.1_26721.t1 | 1 | 1 | Ribosomal_L36e | 5 | 73 | 5.0e-34 | 116.1 | 7.7e-38 | 5.7e-34 | 116.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_38.1_26721.t1 | gi|524878057|ref|XP_005095721.1| | PREDICTED: 60S ribosomal protein L36 [Aplysia californica] | 3.0e-30 |
| pfu_aug2.0_38.1_26721.t1 | gi|507700498|ref|XP_004715205.1| | 6.0e-29 | |
| pfu_aug2.0_38.1_26721.t1 | gi|749785238|ref|XP_011146371.1| | PREDICTED: 60S ribosomal protein L36-like [Harpegnathos saltator] | 2.0e-28 |
| pfu_aug2.0_38.1_26721.t1 | gi|751212048|ref|XP_011158784.1| | PREDICTED: 60S ribosomal protein L36 [Solenopsis invicta] | 2.0e-28 |
| pfu_aug2.0_38.1_26721.t1 | gi|350424118|ref|XP_003493694.1| | 2.0e-28 |
Transcript
| Transcript ID | pfu_aug2.0_38.1_26721.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_38.1_26721.t1 atggatggcagtgcttgtacaaagcatgcacgatttgtgcgggatttggtgagggaagtaacaggttttgccccttacga gagaagaattcaggaattgctgagaatttccaaggacagaagagcactcaagtttgcaaagaaaaggttgggttcacaca tccgcgccaagaggaagagggaagaaatgcagaatgtgttacagaagatgagaaaagcaaaggatcacaagtga |
|
Protein
| Protein ID | pfu_aug2.0_38.1_26721.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_38.1_26721.t1 MDGSACTKHARFVRDLVREVTGFAPYERRIQELLRISKDRRALKFAKKRLGSHIRAKRKREEMQNVLQKMRKAKDHK |
|