Gene
| Gene Model ID | pfu_aug2.0_38.1_26723 |
|---|---|
| Locus | scaffold38.1 : 533213 ... 554326 : + |
| To GenomeBrowser | scaffold38.1:533213..554326 |
| Genes list of scaffold | scaffold38.1 |
| Synonym | pfu_aug1.0_7004.1_31315 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_38.1_26723.t1 | 2 | 1 | MIB_HERC2 | 885 | 944 | 1.3e-19 | 69.8 | 6.5e-13 | 3.2e-09 | 36.6 |
| pfu_aug2.0_38.1_26723.t1 | 2 | 2 | MIB_HERC2 | 958 | 1017 | 1.3e-19 | 69.8 | 1.0e-12 | 5.0e-09 | 36.0 |
| pfu_aug2.0_38.1_26723.t1 | 1 | 1 | Arf | 1518 | 1673 | 4.4e-32 | 110.7 | 2.2e-35 | 1.1e-31 | 109.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_38.1_26723.t1 | gi|676462712|ref|XP_009056358.1| | hypothetical protein LOTGIDRAFT_227454 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_38.1_26723.t1 | gi|524873478|ref|XP_005093485.1| | PREDICTED: ADP-ribosylation factor-like protein 15-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_38.1_26723.t1 | gi|635028168|ref|XP_007970456.1| | PREDICTED: ADP-ribosylation factor-like protein 15 isoform X1 [Chlorocebus sabaeus] | 3.9937e-43 |
| pfu_aug2.0_38.1_26723.t1 | gi|658866889|ref|XP_008416314.1| | PREDICTED: ADP-ribosylation factor-like protein 15 isoform X1 [Poecilia reticulata] | 7.00649e-43 |
| pfu_aug2.0_38.1_26723.t1 | gi|675787322|ref|XP_008951051.1| | PREDICTED: ADP-ribosylation factor-like protein 15 [Pan paniscus] | 8.99634e-43 |
Transcript
| Transcript ID | pfu_aug2.0_38.1_26723.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_38.1_26723.t1 atgggaaacgaaaatggaaagcagcgagctcaggataaaacatcattagtaaataaagaggatgatttgtacaaagagaa aggaagaggtgaaagctctgtggatttggatttttcaaacgtaaggcatccaaaatcaactgaacaagtgagcctacctt tgcagtcctcgatgagagagaacgagagtgaacaattcagccaacaacccaatattgttgagaaatcaaagagaccgtct gaagaattcacaaaaagtaaactcgtatcgtcctttagtggtacacagagacagcagagtgaaactgtgtcgtctgtcag tcaaaggcatcatgttgcagacgtacctgtttacgggaagaactatttcactcgtcaagatgagagcttcgtaaataata tatcttgggatttagaggaacaacagctcagtttaaaaaatgttctagacgggactttaagaacagaattgcaacaaaag agggatgagccggacgcaagtgctcaaaattcaagtttgctgcatgatagagttgacttgttggaatctccaacaagtga gcatcttgcagacgacaggcattcagttgtctcccttacggacaatggaaacagggacatttctgtccagattcgacaga ccctcgaggcccagacccggagtcaatatcaattnaattattttcacatcttactgttcctaggtgaaagctctgtcgat ttggatttttcaaacgtagggcatccagagaaatcaagtgaacaagtgagcctacctctgcagtcctcggtgagagagaa agagagtgaacaattcagccaacaacccaatattgttgagaaatcaaagagaccgtctgaagaattcacaaaaagtaaac tcgcatcgtcattgagtgatataccgagacagcagagtgaaactgtgtcgtctgtcagtccaaggcatcattttgcagac gtacctgtttacgggaagaactatttcactcgtcaagatgagagcttcgtaaatgatatttcttgggatttagaggaaca accgctcactttaaacaaagttctagataggactgtaagaacagaattgcaactgaagagggatgagccggacgcaagtg ctcaaaattcaagattgctgcatgatagagttgactcgttggaatctccagcaagtcagcatctcgcaggcgacaggcat tcagttgtctcccttacggacaatggaaacagggacatttctgtccagattcgacagaccctcgaggcccagttggaaga gagaagccaacagcacgtagcacaattaaatgaattggaatttgctttggaatccttgcaaacaagatcagaaaagaaag acatagctatagcagttctttctgacgttgtcgataaactgaccaatcaaattgatcttctgacaaatgctgcagagaac agaagtcaagtctcggacatagattgcgcagaccccgactccgaatcgactagtcccgttagtgagacacctgctcaaca agacgacgagaatgaagtggggttagaggaaacggttgtatgtactaaaagggaggaggaacccaaggagtcccagacca gacgtcagccaaaagaagctgtgaacaccacaagatcagaaaatagacgcaatgaggacgtcgtgaaaagattatcccgt actgaggaggcacgcagatccatctcccctgaaaccagacattcacggacagaagaaaaggaatgggattctaatataga atggagtaagattcacttgtttgagtcttttgattttgatattgcgcaacatgtaaaaagcattcatattttcgtagcat taccagatccggtacccgttcaggaacagcctataaaacatgtgagcttgggacactggatagatattgctaacgaagaa atcgcaaatggtaaagctttctcagtgggtaatggttgtggtccgtgcacggtgctatgttttgatgtgtcggacagtat gaagggggatccattcaaacacatgatcatccttgggctgcggtttgtaaaggagaggctgagaccgggaggaccaagtc cgttaatgggagcagttgctctagcttttggttgcataagaggaaccatgaagccgcataagacggtgccatcccgtgtc atctttttcacggatggattagttacccaatctgccataacgggtggtcctgatatgtttagtagaacagaaaatttggc gaaactcatggaaattgatcaggagtgtatggcgcatcaggagaatatcttgcctcaaatgagaaaggagcacatcagaa tacattttgtaccactcggagctgcagttatcaatccgcacatgttgtccgtttcaaagaaaacaaatgggaggatagtc cgtcctaaagatattgacagactcacaaaacacagtcaatacgctatgatggtgacaaagttaaaagaggccaagaaagc aggaaaagagtttgaattgccagacgatctcacaagtgatgatatggacgagctccaggagttgatgagatttgatccct ccgtcactgttgacgactctgatgagagtgggagtgagcaaggagatggtcaaacagcaaacagtgagaacgatcctaac atgccgccgttagggacaagggtccggaggggtccggactggaacagtaactgggaccaccaggactccaatggaccggg tacagtggtcagtcataccaagaaaggttggatttggattatgtgggacaatgggcacaggaaccaatatccttacggaa agaacggtaactttggtgtgattgctgtggatgaaccaagaatcttagagcagaaccagttgatagaacccggatgtcta gtgacgagaggtcccgactggagagacaacgataaagatggaggggcggggagtgtgggggccgtcttcaggaaacacca tgacggaagtgtcggggtgcgatggcccagtggtattatgagaaggtataaattcggaaagggaggatttttcgaggtca aaatttgtgatccctatgacccggaagtccaggctgctgtggcgtcaggtgggaagactaagatttctctgaaggatcca acgttagatgatacggtaaatgaagaggatgtcaagaaaaaatcaacagcacatgcgcagaagaacacttccatagatga aatgaacaagcgtaatgctatgaagcaaaccattggtgaaacaagtggcagaaatgcgacggaagagaacaaacaaaacg tgtcaaattttgatgaaaagacacaaacagttgacaaatccgtcgaagagatgaataggcgaaatacagtccaaaataaa tcacctggaaaatcaagtacaagtcttgttgaagaaatgaatatgcgcaacgcaaataaaggaccccctgacggattggg tagagatgatactgacatagacggccctaaagaagatgtagacctcacagacgatggctacgccaaggaactgggtggga ttaaagaggttgtcattccggtagataagcgaggaaacgacaagtccgtccactcagattgtacggaagaaatggataca acgcttgacatgacgaataaagatgtcaggacgaacgaaaacctaacagaccaaacacagtcagacaaacacggatcaat gcacgaatcaagaagagatggcagtgatggtcaaaactctgaaattcgtaatgctaacgaaaatctgcttggtgctaaac caaaggttcctacgaaaggtcaagttaatatgacagacacaatgaaagaaggacagatgcgacaagacgtgcatgaagtt cgcacaaaaatgaatggtaaaacagtgaaatctgaaaaagagaggaaaaaagacaatgttatgctggcgacatcattaag aacatcatcttttgatgaaccagatgaggaggagatcacgaatgtttttacacctccacagattacacaagatcacgtga ccacagaatccaaaaatagaacgggaactctgagtacaatgggcaatgtatcaaatattagtacaaactcggatttacag aaaagttcaaacctctccgatttgaaagacagtaatacgggtgaccttgacctagatggaggtgaccatgaccttagttt tgagcataattctgtaccgtcccctgttgcatctgacgatgggtctagtcggaaaatgtcgatgacgtcatctggcacgc agtcagtagtcgaggatctcagcagttccttttcctctgaagcatcaagtcattcaagggaagaggatgcagatggccaa caagatgacgatgttttttggcaacgaaagggagaaaatggtggctgggtaaatttctcaccagacgtaagtgcaaagat agaaagggcgtacagaaggaatcctaaaacgacaaccagctatctagaaaataagaaaaggtctacttatatcagtaata attgcttcagtaacagaaatatcaagttttttaggcgcctttgtggattcagccctccagcagagaagccaaatctaaat gtgctatgtttgggattgaccaaatctgggaagagtacattgcttgctgtattaagtggagagggactggatgaggttca gcccactgttggttttagcatcaaagccctcatgtttgatgattgcatcttagatgtaaaggaactaggaggtggtgaaa atgtgcggccatattgggaccgttatttcagtggatctcagggtgtagtttttgttgtcaatagtgctgcgtccgaggaa gaaatgacacaagcaaacactgaattacataaagcattagctgacccagagttggatggtctccctttactgctattatg taatttttctgatgtagatggtgctaggtcgacttcacaggtggaggaaaagctggaggtacgcttagagacaggtcata gagaatgtgtcatcgccagctgtagtacaaaggacaaagacagcattaaaagcgccttccttaaatataacaaaattcta atggcaaacagagctaaaagtaaggaagcaaaagatggggagtttgacagtgtctga |
|
Protein
| Protein ID | pfu_aug2.0_38.1_26723.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_38.1_26723.t1 MGNENGKQRAQDKTSLVNKEDDLYKEKGRGESSVDLDFSNVRHPKSTEQVSLPLQSSMRENESEQFSQQPNIVEKSKRPS EEFTKSKLVSSFSGTQRQQSETVSSVSQRHHVADVPVYGKNYFTRQDESFVNNISWDLEEQQLSLKNVLDGTLRTELQQK RDEPDASAQNSSLLHDRVDLLESPTSEHLADDRHSVVSLTDNGNRDISVQIRQTLEAQTRSQYQXNYFHILLFLGESSVD LDFSNVGHPEKSSEQVSLPLQSSVREKESEQFSQQPNIVEKSKRPSEEFTKSKLASSLSDIPRQQSETVSSVSPRHHFAD VPVYGKNYFTRQDESFVNDISWDLEEQPLTLNKVLDRTVRTELQLKRDEPDASAQNSRLLHDRVDSLESPASQHLAGDRH SVVSLTDNGNRDISVQIRQTLEAQLEERSQQHVAQLNELEFALESLQTRSEKKDIAIAVLSDVVDKLTNQIDLLTNAAEN RSQVSDIDCADPDSESTSPVSETPAQQDDENEVGLEETVVCTKREEEPKESQTRRQPKEAVNTTRSENRRNEDVVKRLSR TEEARRSISPETRHSRTEEKEWDSNIEWSKIHLFESFDFDIAQHVKSIHIFVALPDPVPVQEQPIKHVSLGHWIDIANEE IANGKAFSVGNGCGPCTVLCFDVSDSMKGDPFKHMIILGLRFVKERLRPGGPSPLMGAVALAFGCIRGTMKPHKTVPSRV IFFTDGLVTQSAITGGPDMFSRTENLAKLMEIDQECMAHQENILPQMRKEHIRIHFVPLGAAVINPHMLSVSKKTNGRIV RPKDIDRLTKHSQYAMMVTKLKEAKKAGKEFELPDDLTSDDMDELQELMRFDPSVTVDDSDESGSEQGDGQTANSENDPN MPPLGTRVRRGPDWNSNWDHQDSNGPGTVVSHTKKGWIWIMWDNGHRNQYPYGKNGNFGVIAVDEPRILEQNQLIEPGCL VTRGPDWRDNDKDGGAGSVGAVFRKHHDGSVGVRWPSGIMRRYKFGKGGFFEVKICDPYDPEVQAAVASGGKTKISLKDP TLDDTVNEEDVKKKSTAHAQKNTSIDEMNKRNAMKQTIGETSGRNATEENKQNVSNFDEKTQTVDKSVEEMNRRNTVQNK SPGKSSTSLVEEMNMRNANKGPPDGLGRDDTDIDGPKEDVDLTDDGYAKELGGIKEVVIPVDKRGNDKSVHSDCTEEMDT TLDMTNKDVRTNENLTDQTQSDKHGSMHESRRDGSDGQNSEIRNANENLLGAKPKVPTKGQVNMTDTMKEGQMRQDVHEV RTKMNGKTVKSEKERKKDNVMLATSLRTSSFDEPDEEEITNVFTPPQITQDHVTTESKNRTGTLSTMGNVSNISTNSDLQ KSSNLSDLKDSNTGDLDLDGGDHDLSFEHNSVPSPVASDDGSSRKMSMTSSGTQSVVEDLSSSFSSEASSHSREEDADGQ QDDDVFWQRKGENGGWVNFSPDVSAKIERAYRRNPKTTTSYLENKKRSTYISNNCFSNRNIKFFRRLCGFSPPAEKPNLN VLCLGLTKSGKSTLLAVLSGEGLDEVQPTVGFSIKALMFDDCILDVKELGGGENVRPYWDRYFSGSQGVVFVVNSAASEE EMTQANTELHKALADPELDGLPLLLLCNFSDVDGARSTSQVEEKLEVRLETGHRECVIASCSTKDKDSIKSAFLKYNKIL MANRAKSKEAKDGEFDSV |
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