Gene
| Gene Model ID | pfu_aug2.0_380.1_00670 |
|---|---|
| Locus | scaffold380.1 : 3216 ... 44098 : + |
| To GenomeBrowser | scaffold380.1:3216..44098 |
| Genes list of scaffold | scaffold380.1 |
| Synonym | pfu_aug1.0_10980.1_46297 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_380.1_00670.t1 | 3 | 1 | LRR_6 | 512 | 528 | 2.2e-06 | 27.1 | 0.12 | 590.0 | 1.1 |
| pfu_aug2.0_380.1_00670.t1 | 3 | 2 | LRR_6 | 534 | 556 | 2.2e-06 | 27.1 | 3.4e-05 | 0.17 | 12.0 |
| pfu_aug2.0_380.1_00670.t1 | 3 | 3 | LRR_6 | 560 | 581 | 2.2e-06 | 27.1 | 0.00011 | 0.53 | 10.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_380.1_00670.t1 | gi|676494594|ref|XP_009066612.1| | hypothetical protein LOTGIDRAFT_229827 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_380.1_00670.t1 | gi|504143671|ref|XP_004584268.1| | PREDICTED: C-Maf-inducing protein [Ochotona princeps] | 0.0 |
| pfu_aug2.0_380.1_00670.t1 | gi|585667931|ref|XP_006817403.1| | PREDICTED: c-Maf-inducing protein-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_380.1_00670.t1 | gi|675885242|ref|XP_009028123.1| | hypothetical protein HELRODRAFT_88288, partial [Helobdella robusta] | 0.0 |
| pfu_aug2.0_380.1_00670.t1 | gi|383860476|ref|XP_003705715.1| | PREDICTED: C-Maf-inducing protein-like [Megachile rotundata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_380.1_00670.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_380.1_00670.t1 atggcgacgatagaaggcaacagtaccgactccagctcgacagaccccctgatcctgggggagagggagctggggtcgcc aattcacaccgtggccacggaccctggggcgttgtcggactactccagggtcccactgttgagaaatgactctgggtcga gtttgacaatcgggagtatgccctcgaccccaccggctgtgtattctaaacctttccaaggaccgcgatttaaattgatt catgagggagatatacaaatttgtagactcaatcacacaagaactattgttagtaaaattatgaactcgagatatttgag acgttgggaaagccatcacattgttttggggaaaaatgacattagatctgcaacggtgattggaatgatggagaatccga ttccttattcaagtatagaggacgtccatataatatcacgatgggacgctggtcagaagttctgtatacgcataaccatt cccgatgggtcactcttaatccaggcccacaattcatacatcagggatcagtggctgcattcaatattatggaagaagca catgtacaagtatgagaaactccttaagaacgccagacgaccagaggttctggtcaaagaaattaagaacctggcccctc tccagaatgcctttacacgggaaagaaagaatttattacggtttgattttaaggaatgttttaagaaagcaacaactaaa tctgcacaagggatgcgtgactctagaataatgactccggccttttcaattaagaacatgcatagccccgccagtacgtg cccccacccccgggtcttacctaacctcgtagctgtttgtctggctgccgtctacacatgctttgaggaaaagaaaaatg caatgcaagacaacacattaaatacaatagatactcaagagtgggagagtaaactactgtgttacataggcatgatggaa actatgtcagagtttgaggactggaggtgtgtattagggagtctattacagcctattccattccctaatgaaaaaatgaa gtcaacaatccgcaatattgccacagatgagcattgtgatgtacatcagaccatacttggaatacgggagggaaaagagg gctggttccatctctatatcccggggagtataggctgtgatgatgagggagaactgtgggggtgtatgctaaaaacacta attcactgttgttgtaagaggaagaagtttctgtttgaaatgaacaagttgattggtccagtaatgttactggcgttacg ggaaaacgaggcagctatggaggttttatgtgcaatgttagaattagacgtagtagaaaataacgacttaaaaatgcaga tggtcactacactacaaagtacctcaacagggaaacggatgtacaccgatctgtgtgaacgacagatagcacttagggaa ttgcaacagaaaggaggaccaaagaaattaactctaccatctaagtcaacagactcggatttagctaaaatgttgagttc tgggtcatttggaaacttggaatgtcttagccttgcctttacccacgttactagtgcgtgtgccaatgatcttatcaaat taccatcactacgctatcttaatctatggtctacacagtttggtgacacgggccttcaattgatttcggagcaccttcac aaattacaggttcttaacttgtgtgaaactccggtcaccgacaagggactggtctgcctatcatttgatgcagtagagtt aagctctgcccacagtttatatggtagagttaagctccacccacagttgatgtggtag |
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Protein
| Protein ID | pfu_aug2.0_380.1_00670.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_380.1_00670.t1 MATIEGNSTDSSSTDPLILGERELGSPIHTVATDPGALSDYSRVPLLRNDSGSSLTIGSMPSTPPAVYSKPFQGPRFKLI HEGDIQICRLNHTRTIVSKIMNSRYLRRWESHHIVLGKNDIRSATVIGMMENPIPYSSIEDVHIISRWDAGQKFCIRITI PDGSLLIQAHNSYIRDQWLHSILWKKHMYKYEKLLKNARRPEVLVKEIKNLAPLQNAFTRERKNLLRFDFKECFKKATTK SAQGMRDSRIMTPAFSIKNMHSPASTCPHPRVLPNLVAVCLAAVYTCFEEKKNAMQDNTLNTIDTQEWESKLLCYIGMME TMSEFEDWRCVLGSLLQPIPFPNEKMKSTIRNIATDEHCDVHQTILGIREGKEGWFHLYIPGSIGCDDEGELWGCMLKTL IHCCCKRKKFLFEMNKLIGPVMLLALRENEAAMEVLCAMLELDVVENNDLKMQMVTTLQSTSTGKRMYTDLCERQIALRE LQQKGGPKKLTLPSKSTDSDLAKMLSSGSFGNLECLSLAFTHVTSACANDLIKLPSLRYLNLWSTQFGDTGLQLISEHLH KLQVLNLCETPVTDKGLVCLSFDAVELSSAHSLYGRVKLHPQLMW |
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