Gene
| Gene Model ID | pfu_aug2.0_380.1_00675 |
|---|---|
| Locus | scaffold380.1 : 113470 ... 120085 : - |
| To GenomeBrowser | scaffold380.1:113470..120085 |
| Genes list of scaffold | scaffold380.1 |
| Synonym | pfu_aug1.0_4940.1_38029 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_380.1_00675.t1 | 3 | 1 | BTB | 53 | 163 | 2.8e-22 | 78.7 | 9.2e-25 | 1.1e-21 | 76.8 |
| pfu_aug2.0_380.1_00675.t1 | 3 | 1 | BACK | 141 | 166 | 2.1e-31 | 107.7 | 1.0 | 1300.0 | -0.8 |
| pfu_aug2.0_380.1_00675.t1 | 7 | 1 | Kelch_6 | 146 | 166 | 3.5e-38 | 128.2 | 2.1 | 2600.0 | -1.2 |
| pfu_aug2.0_380.1_00675.t1 | 3 | 2 | BTB | 167 | 197 | 2.8e-22 | 78.7 | 0.71 | 880.0 | -0.1 |
| pfu_aug2.0_380.1_00675.t1 | 3 | 2 | BACK | 171 | 271 | 2.1e-31 | 107.7 | 5.0e-23 | 6.2e-20 | 70.9 |
| pfu_aug2.0_380.1_00675.t1 | 7 | 1 | Kelch_5 | 308 | 327 | 6.7e-16 | 57.8 | 5.5 | 6800.0 | -2.9 |
| pfu_aug2.0_380.1_00675.t1 | 3 | 3 | BACK | 310 | 388 | 2.1e-31 | 107.7 | 6.4e-14 | 7.9e-11 | 41.7 |
| pfu_aug2.0_380.1_00675.t1 | 7 | 2 | Kelch_5 | 423 | 444 | 6.7e-16 | 57.8 | 5.5 | 6800.0 | -2.9 |
| pfu_aug2.0_380.1_00675.t1 | 7 | 2 | Kelch_6 | 425 | 447 | 3.5e-38 | 128.2 | 2.4 | 2900.0 | -1.3 |
| pfu_aug2.0_380.1_00675.t1 | 6 | 1 | Kelch_3 | 425 | 483 | 8.3e-18 | 64.0 | 0.068 | 84.0 | 3.5 |
| pfu_aug2.0_380.1_00675.t1 | 6 | 1 | Kelch_1 | 428 | 453 | 1.49995e-41 | 139.6 | 0.54 | 670.0 | -0.1 |
| pfu_aug2.0_380.1_00675.t1 | 3 | 3 | BTB | 437 | 450 | 2.8e-22 | 78.7 | 2.3 | 2800.0 | -1.8 |
| pfu_aug2.0_380.1_00675.t1 | 7 | 3 | Kelch_5 | 475 | 511 | 6.7e-16 | 57.8 | 1.3e-05 | 0.016 | 15.1 |
| pfu_aug2.0_380.1_00675.t1 | 6 | 2 | Kelch_1 | 476 | 522 | 1.49995e-41 | 139.6 | 3.9e-16 | 4.8e-13 | 48.4 |
| pfu_aug2.0_380.1_00675.t1 | 7 | 3 | Kelch_6 | 476 | 525 | 3.5e-38 | 128.2 | 1.1e-11 | 1.4e-08 | 34.5 |
| pfu_aug2.0_380.1_00675.t1 | 5 | 1 | Kelch_4 | 476 | 521 | 1.0e-26 | 92.4 | 6.4e-10 | 7.9e-07 | 28.7 |
| pfu_aug2.0_380.1_00675.t1 | 5 | 1 | Kelch_2 | 476 | 521 | 1.3e-22 | 78.5 | 2.9e-08 | 3.6e-05 | 23.3 |
| pfu_aug2.0_380.1_00675.t1 | 6 | 2 | Kelch_3 | 487 | 532 | 8.3e-18 | 64.0 | 3.3e-08 | 4.0e-05 | 23.6 |
| pfu_aug2.0_380.1_00675.t1 | 7 | 4 | Kelch_5 | 523 | 542 | 6.7e-16 | 57.8 | 0.00019 | 0.23 | 11.4 |
| pfu_aug2.0_380.1_00675.t1 | 6 | 3 | Kelch_1 | 524 | 568 | 1.49995e-41 | 139.6 | 2.0e-11 | 2.5e-08 | 33.3 |
| pfu_aug2.0_380.1_00675.t1 | 5 | 2 | Kelch_4 | 524 | 568 | 1.0e-26 | 92.4 | 3.6e-09 | 4.5e-06 | 26.3 |
| pfu_aug2.0_380.1_00675.t1 | 7 | 4 | Kelch_6 | 525 | 571 | 3.5e-38 | 128.2 | 1.4e-10 | 1.8e-07 | 31.0 |
| pfu_aug2.0_380.1_00675.t1 | 5 | 2 | Kelch_2 | 528 | 568 | 1.3e-22 | 78.5 | 0.00054 | 0.67 | 9.8 |
| pfu_aug2.0_380.1_00675.t1 | 6 | 3 | Kelch_3 | 534 | 579 | 8.3e-18 | 64.0 | 0.015 | 18.0 | 5.6 |
| pfu_aug2.0_380.1_00675.t1 | 6 | 4 | Kelch_1 | 573 | 615 | 1.49995e-41 | 139.6 | 1.7e-15 | 2.1e-12 | 46.3 |
| pfu_aug2.0_380.1_00675.t1 | 7 | 5 | Kelch_5 | 575 | 596 | 6.7e-16 | 57.8 | 9.1e-06 | 0.011 | 15.6 |
| pfu_aug2.0_380.1_00675.t1 | 7 | 5 | Kelch_6 | 576 | 619 | 3.5e-38 | 128.2 | 5.8e-11 | 7.2e-08 | 32.2 |
| pfu_aug2.0_380.1_00675.t1 | 5 | 3 | Kelch_4 | 576 | 615 | 1.0e-26 | 92.4 | 5.7e-06 | 0.0071 | 16.0 |
| pfu_aug2.0_380.1_00675.t1 | 5 | 3 | Kelch_2 | 577 | 615 | 1.3e-22 | 78.5 | 2.5e-06 | 0.0031 | 17.2 |
| pfu_aug2.0_380.1_00675.t1 | 6 | 4 | Kelch_3 | 582 | 621 | 8.3e-18 | 64.0 | 0.0088 | 11.0 | 6.3 |
| pfu_aug2.0_380.1_00675.t1 | 5 | 4 | Kelch_4 | 619 | 665 | 1.0e-26 | 92.4 | 0.0021 | 2.6 | 7.8 |
| pfu_aug2.0_380.1_00675.t1 | 7 | 6 | Kelch_5 | 619 | 637 | 6.7e-16 | 57.8 | 0.0073 | 9.1 | 6.3 |
| pfu_aug2.0_380.1_00675.t1 | 7 | 6 | Kelch_6 | 620 | 671 | 3.5e-38 | 128.2 | 8.7e-05 | 0.11 | 12.7 |
| pfu_aug2.0_380.1_00675.t1 | 5 | 4 | Kelch_2 | 624 | 666 | 1.3e-22 | 78.5 | 1.8e-05 | 0.023 | 14.4 |
| pfu_aug2.0_380.1_00675.t1 | 6 | 5 | Kelch_1 | 626 | 665 | 1.49995e-41 | 139.6 | 2.7e-05 | 0.034 | 13.7 |
| pfu_aug2.0_380.1_00675.t1 | 6 | 5 | Kelch_3 | 629 | 673 | 8.3e-18 | 64.0 | 0.0023 | 2.9 | 8.1 |
| pfu_aug2.0_380.1_00675.t1 | 7 | 7 | Kelch_6 | 685 | 725 | 3.5e-38 | 128.2 | 0.00011 | 0.14 | 12.3 |
| pfu_aug2.0_380.1_00675.t1 | 7 | 7 | Kelch_5 | 689 | 721 | 6.7e-16 | 57.8 | 0.053 | 66.0 | 3.6 |
| pfu_aug2.0_380.1_00675.t1 | 6 | 6 | Kelch_1 | 692 | 724 | 1.49995e-41 | 139.6 | 1.7 | 2200.0 | -1.7 |
| pfu_aug2.0_380.1_00675.t1 | 5 | 5 | Kelch_2 | 692 | 724 | 1.3e-22 | 78.5 | 0.0027 | 3.3 | 7.6 |
| pfu_aug2.0_380.1_00675.t1 | 6 | 6 | Kelch_3 | 693 | 734 | 8.3e-18 | 64.0 | 0.0013 | 1.7 | 8.9 |
| pfu_aug2.0_380.1_00675.t1 | 5 | 5 | Kelch_4 | 714 | 727 | 1.0e-26 | 92.4 | 0.038 | 48.0 | 3.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_380.1_00675.t1 | gi|676494569|ref|XP_009066604.1| | hypothetical protein LOTGIDRAFT_229825 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_380.1_00675.t1 | gi|585691082|ref|XP_006821183.1| | PREDICTED: gigaxonin-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_380.1_00675.t1 | gi|260834939|ref|XP_002612467.1| | hypothetical protein BRAFLDRAFT_214407 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_380.1_00675.t1 | gi|697505915|ref|XP_009681222.1| | PREDICTED: gigaxonin [Struthio camelus australis] | 0.0 |
| pfu_aug2.0_380.1_00675.t1 | gi|733906523|ref|XP_010716364.1| | PREDICTED: gigaxonin isoform X2 [Meleagris gallopavo] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_380.1_00675.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_380.1_00675.t1 atgttttattcgaatagaatcatctgcttaaaattagagcttcttaatgacacagataaaatggcagcgcccatgaatca aacgaattttactgattctggtcaatcaaaccatgatttctgccttgagaagcatgcgaagaaacttctatttgcattga accaaaacagaatcagtaaaaacttctgtgatggagttgtcaagatacacaatgaatctattcctgtacagcgctgtgtc ttggctgcttccagtcattatttcaagctcgcctttgaaagaaacatctcaacgcaggaagaagaagaatccacggcttg tatcgacattagcacccttggtataaacacccaaacttttatggctatactagactatatctatacatctgatattgagt tactagaggagaacatacaggacattctacaagccgcagacctacttctgttgttagacctgaaaagcagatgttgtgaa ttcctagaaagctgcatatcgtcacataactgcctggggatattggagttttcacagcagtactcatgtccttgggtaca tcacaaagcagaaacattccttgatgaaaattttgggcagatcatactcagtgatgaattcctccaacttcctacggaac gaatgaaatctctccttcagcgtgacacgctgcacgtcacctcagaattacagttactgagggccattttgttgtggacg caggtcgacaaaaaggctcgagagcaattgacgttcaatcttgttaaagagtgcttgagacccagaaatatctgtcaaga agaatttgaagagatgataaaagcgtttgattcagaggaggattctagctacaggattctcactgaatacattatgacag cctctaatggcattgtaaaacccagaggggttgagaatgtccttgtgtttacaggtggacgtttgtcgcagatcatactc agtgatgaattcctccaacttcctacggaacgactgaaatctctccttctgcgtgacacgctgcatgtcacctcagaatt acagttactgagggccattttgttgtggacgcaggtcgacaaaaagactcgagaggaattgatgttcgaccttgttaaag agtgcttgagacccagaaatatctgtcaagaaaaatttgaagagatgataaaagcttttcattctgagaaggattctagc tacaggattctcactgaatacatcatgacagcctctaatggcattgtaaaacccagaggggttgagaatgtcgttgtgtt tacaggtgggcgtttgtcatatgctgaacaggggaaaatcctctcagatgtcacgtgttatgttaggaagaacaaccaat tggtgtacggtacggtagatggataccaagagaaccaaccgtttaagctcccaccaatgtcggtgcctagaataggacat ggtgctgttgaatgtggtggatgtttgtacgttgtcggtggccaaactagcggtgatcaggtccttagatctgccgagaa gtatgatcctgccacaaacagatggtatgaaatagccccgatgaaccaggctaggcagaactttcaacttgtagctgtag acgacaaaatatacgctataggaggggagtacgactcggaaatacttgtctccatggaaaagtatgatattttcaggaac gaatgggagccgtgtccagatctcaaacttgggcgtcttttggcgtgtgcagccgttgttgacaaaaaaatctatgtcat aggaggaagaaacaaggacacatattacgaggttgtggagtgttacgatacaagaaacgaaatctggtcatcagcaccgc caatgcatgagagaagatggaatgccaggtccattgctgtttgtggtgacatttacgtttttggtggttataggccaaca ctttgcccgagcaactacggcgtactcaaattctgtcaaaccgaagttttctcgaccaagtccaacaaatggtctctgaa ggatcaatttcctttaccatctgatggcatgatgggtaataccaatcacaattacgtacatgatgcagtgcaccatggga atgaaatttgtcttatcggaggttttcaaagaggagctaacggaggtcattgtctccagattcgagttttagatctagac acgggtacatggcttacggaacatattgatagaccacctgtaggaggctactactcatgttgtagtcttaccgttcccaa agatcttttacataatttagcaaaaaactga |
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Protein
| Protein ID | pfu_aug2.0_380.1_00675.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_380.1_00675.t1 MFYSNRIICLKLELLNDTDKMAAPMNQTNFTDSGQSNHDFCLEKHAKKLLFALNQNRISKNFCDGVVKIHNESIPVQRCV LAASSHYFKLAFERNISTQEEEESTACIDISTLGINTQTFMAILDYIYTSDIELLEENIQDILQAADLLLLLDLKSRCCE FLESCISSHNCLGILEFSQQYSCPWVHHKAETFLDENFGQIILSDEFLQLPTERMKSLLQRDTLHVTSELQLLRAILLWT QVDKKAREQLTFNLVKECLRPRNICQEEFEEMIKAFDSEEDSSYRILTEYIMTASNGIVKPRGVENVLVFTGGRLSQIIL SDEFLQLPTERLKSLLLRDTLHVTSELQLLRAILLWTQVDKKTREELMFDLVKECLRPRNICQEKFEEMIKAFHSEKDSS YRILTEYIMTASNGIVKPRGVENVVVFTGGRLSYAEQGKILSDVTCYVRKNNQLVYGTVDGYQENQPFKLPPMSVPRIGH GAVECGGCLYVVGGQTSGDQVLRSAEKYDPATNRWYEIAPMNQARQNFQLVAVDDKIYAIGGEYDSEILVSMEKYDIFRN EWEPCPDLKLGRLLACAAVVDKKIYVIGGRNKDTYYEVVECYDTRNEIWSSAPPMHERRWNARSIAVCGDIYVFGGYRPT LCPSNYGVLKFCQTEVFSTKSNKWSLKDQFPLPSDGMMGNTNHNYVHDAVHHGNEICLIGGFQRGANGGHCLQIRVLDLD TGTWLTEHIDRPPVGGYYSCCSLTVPKDLLHNLAKN |
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