Gene
| Gene Model ID | pfu_aug2.0_380.1_00678 |
|---|---|
| Locus | scaffold380.1 : 166263 ... 192314 : - |
| To GenomeBrowser | scaffold380.1:166263..192314 |
| Genes list of scaffold | scaffold380.1 |
| Synonym | pfu_aug1.0_4036.1_52172 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_380.1_00678.t1 | 2 | 1 | Herpes_teg_N | 406 | 438 | 1.8e-10 | 40.5 | 0.051 | 760.0 | -0.6 |
| pfu_aug2.0_380.1_00678.t1 | 2 | 2 | Herpes_teg_N | 621 | 771 | 1.8e-10 | 40.5 | 7.6e-14 | 1.1e-09 | 37.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_380.1_00678.t1 | gi|676466719|ref|XP_009057656.1| | hypothetical protein LOTGIDRAFT_163313 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_380.1_00678.t1 | gi|340617945|ref|YP_004736398.1| | 0.0 | |
| pfu_aug2.0_380.1_00678.t1 | gi|37520682|ref|NP_924059.1| | 0.0 | |
| pfu_aug2.0_380.1_00678.t1 | gi|32476514|ref|NP_869508.1| | 0.0 | |
| pfu_aug2.0_380.1_00678.t1 | gi|501277308|ref|WP_012320326.1| | MULTISPECIES: glucosidase [Methylobacterium] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_380.1_00678.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_380.1_00678.t1 atggagagaacacaaaggaagcaagatccagaatggggaccttatctctctaacagacaatggggaactgtgagggagga taccagtcgtgatggaaacgcgtgggaatgtttaagctatgaggaagcatgtagtacagtgtacagatggggtgaagatg gactgtttggttatagtgatagggactgtcatctatgtatgtgcctggcattgtggaatggagaagaccatatcctgaag gagagactgtttggtctcactggaccacagggtaaccatggggaggacatcaaggagttgttatattatttagacggtac acctgatcattcctacatgaaggcattgtacaagtatccgtactcgttcccctatggccagctggtggaggaaaacaaga agagggggaggggggatccagaatacgaaatcatggacacaggtttatttgacagaaatgaatactttgacatacaagtt gagtatgctactaagggccatgaagataaaaaagacttgttttgctgctattccatcacaaaccaaggtgatgtggagag ggaattatgggtaatacctcaattctggttcaggattaagagaaattgtccacaaagtcctttggtgagaactaagacct acttggaccttttgtttacagtagcaagtggaaaagggtataggatacatataaatcctgctgacgatgtagaaattcta tacacacagaatgatgaagaggagccagtgggaaaaggaaattctggtgatgtttatgggaaaaaagatgggtttcacag ttatattatagacggagatgaaagagcatgcgaacgtttcaggaatcagaaattgcccgtcacaggtgataaatgtggaa ttcttcacaaggtcactctacaaccaaaggcagtgaagaaaatttactgggcaatgtatggaaacatgtatggctgtggg gacataggtgacatactattgagttgtgaggctgctttcaaagagggtcaacaaaaagctagattatataggctagaggc acctctactgaagcatattgatgaatcatggaaagaagaaattatccgccaagcttacgctggattattctggaacaaac agttttaccattacaatgttgggttgtcaaataaccaaggaaatccagagagcaaggatacggtgaaggctctttccaac aaagtaattgataaagataacataatgcctagaggaaagaactggcggaaagcagctgctaagaagaacagacaagataa ggcagatgtgggtcattcttaccccacagatattggccatgtccaatcatctgtgcctctgggtgtaggcttcgtcctaa cacctacgacatctgtatcggcaggagtgatacttgacactcctgtaacagtggtctctgcggctctccctgagaccact aatgcaaaatttagctcaaatactgactcaaaatttgcctcaaaacctactgcaaaatttagctctaaacttgttacaaa taatacttcaaataacatcataaaatgttccacaacaactccaacgaatacctctctttcatatactgaaactatcattt ctgaaatgagtatggaaaaatgccatgaaaatagcaattcagctgaaaagatacagaggaacagaaagtttcagaatgag aatatggtatttgcaactcacaatcagggagactttcatagcacatctcaaagcaaatcttatttgtctcaaagtgataa catttctcaccttgatgaggatgcatttcgaaatattgatggtataagtgcaagtaatgttgataatgcaatgcagactt cagatgtaacgctttttgcttctcatagtcaaagtgactttaggtattcagtattttcaagaggtagtcagtgcacatgc atgtctctttctatgattttgagccttcaacaaggtattcagctatcaaccaatacattagatcttgtgcttcatcatgg tgacaatttatacagaaatgctgtcttggatttacaagtaaaggggaaatttgttaataagctgttgtcgtaccaggaac ttccattagcagtacaatatcgagaagattttttctcagtcataaagcacacaatagtttatggtttacctgttattcag tctcataatcttgaagtattttcattacatgatggcattgtctttgctttaaccaagtctgaaagtctccttatcatgat aggggcaatctgctctgcaatcatatttaaagatggaaaatacctcttatttgattcacattcacatgggtctgatggct taagttcatctgatggcaaagcattgttaaaaatgttctcatgtattgatgacttagtattgttcctttattccttctat tcaagttgcaacatagatcttgagtctcaatttgagattttacctgtaacagttgaaagaattagtcatagtttctttga cttcgaacagaacagtgtcgaaagattaacaagcagaaaaaagtatatgagagaatatatgcagaagaaacgagaaaaca acaatttcagatgcaaagaattgcaagataagcaaaaggcacgacttcatgagcagtacagagatgaagaaannnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngagatgacactcaatacagagaagtagagaaacagagagagtt atctagcaagagaaaatctagattagaccagttttataaggaaaaagaagtattagccaaaagaaaagctagagatgaca gtcaatacagagaagaagagaaacagagagagttatctagcaagagaaaatctagattagaccagtattataaggaaaaa gaagtattagccaaaagaaaagctagagatgacagtcaatacagagaagaagagaaacagagagagttatctagcaagag aaaatctagattagaccagttttataaggaaaaagaagtattagccaaaagaaaagctagagatgacagtcaatacagag aagaagagaaacagagagaattatcaagtaaaaaaaagctagaagtaacagtttttacaaagaaaaagaaagaatga |
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Protein
| Protein ID | pfu_aug2.0_380.1_00678.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_380.1_00678.t1 MERTQRKQDPEWGPYLSNRQWGTVREDTSRDGNAWECLSYEEACSTVYRWGEDGLFGYSDRDCHLCMCLALWNGEDHILK ERLFGLTGPQGNHGEDIKELLYYLDGTPDHSYMKALYKYPYSFPYGQLVEENKKRGRGDPEYEIMDTGLFDRNEYFDIQV EYATKGHEDKKDLFCCYSITNQGDVERELWVIPQFWFRIKRNCPQSPLVRTKTYLDLLFTVASGKGYRIHINPADDVEIL YTQNDEEEPVGKGNSGDVYGKKDGFHSYIIDGDERACERFRNQKLPVTGDKCGILHKVTLQPKAVKKIYWAMYGNMYGCG DIGDILLSCEAAFKEGQQKARLYRLEAPLLKHIDESWKEEIIRQAYAGLFWNKQFYHYNVGLSNNQGNPESKDTVKALSN KVIDKDNIMPRGKNWRKAAAKKNRQDKADVGHSYPTDIGHVQSSVPLGVGFVLTPTTSVSAGVILDTPVTVVSAALPETT NAKFSSNTDSKFASKPTAKFSSKLVTNNTSNNIIKCSTTTPTNTSLSYTETIISEMSMEKCHENSNSAEKIQRNRKFQNE NMVFATHNQGDFHSTSQSKSYLSQSDNISHLDEDAFRNIDGISASNVDNAMQTSDVTLFASHSQSDFRYSVFSRGSQCTC MSLSMILSLQQGIQLSTNTLDLVLHHGDNLYRNAVLDLQVKGKFVNKLLSYQELPLAVQYREDFFSVIKHTIVYGLPVIQ SHNLEVFSLHDGIVFALTKSESLLIMIGAICSAIIFKDGKYLLFDSHSHGSDGLSSSDGKALLKMFSCIDDLVLFLYSFY SSCNIDLESQFEILPVTVERISHSFFDFEQNSVERLTSRKKYMREYMQKKRENNNFRCKELQDKQKARLHEQYRDEEXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXDDTQYREVEKQRELSSKRKSRLDQFYKEKEVLAKRKARDDSQYREEEKQRELSSKRKSRLDQYYKEK EVLAKRKARDDSQYREEEKQRELSSKRKSRLDQFYKEKEVLAKRKARDDSQYREEEKQRELSSKKKLEVTVFTKKKKE |
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