Gene
| Gene Model ID | pfu_aug2.0_380.1_00680 |
|---|---|
| Locus | scaffold380.1 : 210165 ... 228771 : + |
| To GenomeBrowser | scaffold380.1:210165..228771 |
| Genes list of scaffold | scaffold380.1 |
| Synonym | pfu_aug1.0_24705.1_26197 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_380.1_00680.t1 | 7 | 1 | WD40 | 272 | 309 | 6.2e-23 | 79.7 | 2.4e-07 | 0.0018 | 18.0 |
| pfu_aug2.0_380.1_00680.t1 | 7 | 2 | WD40 | 333 | 346 | 6.2e-23 | 79.7 | 2.0 | 15000.0 | -4.0 |
| pfu_aug2.0_380.1_00680.t1 | 7 | 3 | WD40 | 521 | 531 | 6.2e-23 | 79.7 | 0.13 | 930.0 | -0.1 |
| pfu_aug2.0_380.1_00680.t1 | 7 | 4 | WD40 | 591 | 625 | 6.2e-23 | 79.7 | 2.8e-07 | 0.0021 | 17.8 |
| pfu_aug2.0_380.1_00680.t1 | 7 | 5 | WD40 | 643 | 666 | 6.2e-23 | 79.7 | 1.8e-05 | 0.13 | 12.1 |
| pfu_aug2.0_380.1_00680.t1 | 7 | 6 | WD40 | 685 | 711 | 6.2e-23 | 79.7 | 8.5e-06 | 0.063 | 13.1 |
| pfu_aug2.0_380.1_00680.t1 | 7 | 7 | WD40 | 877 | 910 | 6.2e-23 | 79.7 | 4.0e-05 | 0.3 | 11.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_380.1_00680.t1 | gi|676466893|ref|XP_009057712.1| | hypothetical protein LOTGIDRAFT_191347 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_380.1_00680.t1 | gi|585715306|ref|XP_006825310.1| | PREDICTED: WD repeat-containing protein 66-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_380.1_00680.t1 | gi|390338444|ref|XP_785437.3| | 0.0 | |
| pfu_aug2.0_380.1_00680.t1 | gi|260834570|ref|XP_002612283.1| | hypothetical protein BRAFLDRAFT_246700 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_380.1_00680.t1 | gi|512811103|ref|XP_002937749.2| | PREDICTED: WD repeat-containing protein 66 isoform X1 [Xenopus (Silurana) tropicalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_380.1_00680.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_380.1_00680.t1 atggcagacgaagaggggaaaacaagccctgtcggacaggagaaagcaccatctcccgaacctgcaaaggaagaggaaaa agttgatgatgcaaaccaaaatgctgatgagacaaagcctcaggaaacggagcagaaagaggaggtaaaggatggtgacc aaaacgaaaatgctggcggagatgaaacggagaagaaagatgacgctaaaccagatgaaggcaaggaaacggaacagcaa cagggagaggaaaaaacggatgaaaaggaagagggtaaggaagatggagaacagaaagtggaggagcaacaacagagatc ctcaccggttggtgaagaaacatctgaaacaaaacctgaacaagaagtctctcaagaaagcgtacagaaagaggacagtg acgttaaagttgaagaagtgcaaaaaacagagccagaacagagtacttcagaggaaaagactgaacaagagaccgtgaca gagaaagaacctgaaccaacacctacaacaaaggcagcttcaccaacacctgctacagaatcacagccactcacaagtca agatgttactgtacccaatactgttgatacaccagcaccacctggtgttccagagcctccaaagcttccaacacctgaaa agtcagaaatgggcttagaaagtagcagtatctcaacacaagcattgaacatcatttggtcctttggtttgaatagaagt atacctgtcttgaacctaactgacaatacaaggaagataataatgtatgcatgtgctcacattggagttttatatgactt tgaaaacaatcgacagcacactcttcaaggtcatataaatccgttaacatgtacatgtgtcagtgaggacaagagatggt tggccacagcagataaaggacctgactctactgttattatatgggacacatatactggaattccagtacaaactctgttt gatgatggatcagggaataatgaggggttcgttgccatggcaatgacaccagatgccagatatttggcgacactcagttc atcagaaactcaaattttggcgatctggaattggacagtagatggggagacacccttatgtacagcacagctaaacccga gctttggcgttcagtcatttgtacacttcaaccctgaagatatacactacttagtttgtaacagcgaatctcaagtcatc ttctgtttctggacagacaatcacatggagtattacgccccgcccctcaccgaccaggactttaacaaagccgtgggtcg ttatagtcagtctatattccaaaggaacagcactagagtgttgacgtcaacatctattggcaacctggttgtctgggaca acaacaaacctgtcacaaaattgttgagttctgaaccctcagcagacaaaaaggcattgaagattatcagactgcaagaa agggggataaatgtgttaacaacaactgacaaatttattgtggttggtgatatggcagggcatgtaaaattctttgacca aagtctcaaacttgttcactggtatcaagatttcaatttaggtccagttacttccgtttcatttgcacattatccagaat tcgaacctgttgccaaagaaggaaccaatttcccaccagatgccactatcgaggcccgtaagtttgtcatcaaggatttt gttgtcggaagtagcattgctatttttggaagtgtcaccgctgatggcaccaaagtcaagcatccagaggattggccaat gacagtacaggttattcacagggaacatgatgctgccattcatgctatgacaacccatccttcactaccatatttagtta ttggaagctattctggtcttctcaaaatctggaattacgagaaaaaacaagtgatggtatctcggcagtttgagagaggg aaccttattcggtgttgtgcttttgatccaaggggagcttaccttgccgtgggctttgttaacggatcagtgagagtatt ggacgctataacgttacaagacgagcaggaggaaccgttccgttacgctcgttatgccgtgactcatatcgccttctccc atgattcacagtatatagccactgccgatggtgaatacacagtgtcagtgtttaaacgacagcgaggtttggatgtacaa ccttacatatatctaggaaggtatagggcacactataaggaaatcaaagacatcatatttggggtacatctcgattcaaa tcaacccagacttatgtccctcggaatggacagagtgcttgttgaatatgaccttgaaaatagtgcaaaagacgatttaa gaatttcaagttctgatagaatagaacaaagtgctatcccacaatgcatgacttggtatccaccaatcacaaaggagaat ttcatattaactgctaacgatcaattcaaatttaaattatacaactcaacgacaaaaatgtgcaggaaaacgctattggg accaacatacggaacacccatacaaaagatagctgtagtaccgaccaaggatatcgttaaggacaaacggtacctggcct acattaccaaggataaaatcggcatgcacgtactaccactcgacggtaacccacataacgccatggccctgattggtcac cctgttggggtatcagagatggtgtgtagttttgacggtaaatatctcttcacggctggtggtacggacgcctctgtcca catgtgggaaattaatgtagctgccctggaggcgcagtctaagttaggaggagaggaccttataccattctatggattgt tggacggaggtagggaaggagaactgtttagagaactcgaggactacttctactatgctcagatcagaagccaaggtgtg aacacaatggataagagagaagtgtcaacaaagattaacctgtcagaggtgccgtttgttatgagggccatggggttcta cccctcagaacaagagatagaggacatgttgaatgaggtaaaattcagtcgatatgtagaaactgggcagtacgttgaag atatagatcttggagaatttataagattgtacatcaaccacagacccgcctttggtcttgatccattgaagatagagtgg gcctttgagaaactcggcattgctacatcgagtggtaattccattgaaagaggtgaccttctagatatgctacagacaaa aggtgagcatatgacagagtatgaattggccgagtacctaaccacgttgcttggatacaatgctgagggaggaagtagtg aactgcaggagtttgactccacgactgccggcgatataattgagcaaaatcttcccgtaaacatcacagaagaaatgttt gctaatgaaattctcggattttccatgtacagagatgcattgaatgctgggatggaagcccatggctaa |
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Protein
| Protein ID | pfu_aug2.0_380.1_00680.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_380.1_00680.t1 MADEEGKTSPVGQEKAPSPEPAKEEEKVDDANQNADETKPQETEQKEEVKDGDQNENAGGDETEKKDDAKPDEGKETEQQ QGEEKTDEKEEGKEDGEQKVEEQQQRSSPVGEETSETKPEQEVSQESVQKEDSDVKVEEVQKTEPEQSTSEEKTEQETVT EKEPEPTPTTKAASPTPATESQPLTSQDVTVPNTVDTPAPPGVPEPPKLPTPEKSEMGLESSSISTQALNIIWSFGLNRS IPVLNLTDNTRKIIMYACAHIGVLYDFENNRQHTLQGHINPLTCTCVSEDKRWLATADKGPDSTVIIWDTYTGIPVQTLF DDGSGNNEGFVAMAMTPDARYLATLSSSETQILAIWNWTVDGETPLCTAQLNPSFGVQSFVHFNPEDIHYLVCNSESQVI FCFWTDNHMEYYAPPLTDQDFNKAVGRYSQSIFQRNSTRVLTSTSIGNLVVWDNNKPVTKLLSSEPSADKKALKIIRLQE RGINVLTTTDKFIVVGDMAGHVKFFDQSLKLVHWYQDFNLGPVTSVSFAHYPEFEPVAKEGTNFPPDATIEARKFVIKDF VVGSSIAIFGSVTADGTKVKHPEDWPMTVQVIHREHDAAIHAMTTHPSLPYLVIGSYSGLLKIWNYEKKQVMVSRQFERG NLIRCCAFDPRGAYLAVGFVNGSVRVLDAITLQDEQEEPFRYARYAVTHIAFSHDSQYIATADGEYTVSVFKRQRGLDVQ PYIYLGRYRAHYKEIKDIIFGVHLDSNQPRLMSLGMDRVLVEYDLENSAKDDLRISSSDRIEQSAIPQCMTWYPPITKEN FILTANDQFKFKLYNSTTKMCRKTLLGPTYGTPIQKIAVVPTKDIVKDKRYLAYITKDKIGMHVLPLDGNPHNAMALIGH PVGVSEMVCSFDGKYLFTAGGTDASVHMWEINVAALEAQSKLGGEDLIPFYGLLDGGREGELFRELEDYFYYAQIRSQGV NTMDKREVSTKINLSEVPFVMRAMGFYPSEQEIEDMLNEVKFSRYVETGQYVEDIDLGEFIRLYINHRPAFGLDPLKIEW AFEKLGIATSSGNSIERGDLLDMLQTKGEHMTEYELAEYLTTLLGYNAEGGSSELQEFDSTTAGDIIEQNLPVNITEEMF ANEILGFSMYRDALNAGMEAHG |
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