Gene
| Gene Model ID | pfu_aug2.0_3804.1_15862 |
|---|---|
| Locus | scaffold3804.1 : 586 ... 12767 : + |
| To GenomeBrowser | scaffold3804.1:586..12767 |
| Genes list of scaffold | scaffold3804.1 |
| Synonym | pfu_aug1.0_57193.1_12880 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| pyruvate dehydrogenase e1 component subunit mitochondrial | GO:0008152 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3804.1_15862.t1 | 2 | 1 | Transket_pyr | 1 | 58 | 8.8e-32 | 110.0 | 1.0e-12 | 1.5e-08 | 34.3 |
| pfu_aug2.0_3804.1_15862.t1 | 2 | 2 | Transket_pyr | 111 | 208 | 8.8e-32 | 110.0 | 4.2e-23 | 6.2e-19 | 68.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3804.1_15862.t1 | gi|383851961|ref|XP_003701499.1| | PREDICTED: pyruvate dehydrogenase E1 component subunit beta, mitochondrial [Megachile rotundata] | 0.0 |
| pfu_aug2.0_3804.1_15862.t1 | gi|746850693|ref|XP_011055837.1| | PREDICTED: pyruvate dehydrogenase E1 component subunit beta, mitochondrial-like isoform X2 [Acromyrmex echinatior] | 0.0 |
| pfu_aug2.0_3804.1_15862.t1 | gi|746850691|ref|XP_011055836.1| | PREDICTED: pyruvate dehydrogenase E1 component subunit beta, mitochondrial-like isoform X1 [Acromyrmex echinatior] | 0.0 |
| pfu_aug2.0_3804.1_15862.t1 | gi|759072502|ref|XP_011345876.1| | PREDICTED: pyruvate dehydrogenase E1 component subunit beta, mitochondrial [Cerapachys biroi] | 0.0 |
| pfu_aug2.0_3804.1_15862.t1 | gi|752881716|ref|XP_011258474.1| | PREDICTED: pyruvate dehydrogenase E1 component subunit beta, mitochondrial [Camponotus floridanus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_3804.1_15862.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3804.1_15862.t1 atgacagtaagagatgccttgaactcggctatggatgaagagattcaaagagatgaaagagtgttcttactaggtgaaga agtagctttatatgatggagcttacaaggtttccagaggtctgcatgccaagcatggggacaaacgagtgatagacacac caattacagaggtaataatagtgatagacacatcaattacagaggtaatgatggtgatagacgcaccaattacagaggta gtaatagtgatagacatatcaattacagaggtaataatagtgatagacacaccaattacagaggtaataatagtgataga cacatcaattacagagatgggatttgctggcatagctgttggagcagcaatggttataaactcagctgcaaaaaccttct acatgtctgcaggaacagttcctgttcccatcacgtttagaggccctaacggagccgctgccggtgtagccgcccagcat tctcaatgtttcgcagcatggtacagtcactgcccaggactcaaagtcgtatcacctttcaactcagaagattgtaaagg acttctaaaaagtgcaattagagatcccaacccagtggtagtattagaaaatgagatcatgtatggatcatcattcgaga tgtcagacgaggccctctcacctgactttgtcatacctattgggaagtgtaagatagaaaggcaaggtaataaatttgag aactctgagaccattagatga |
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Protein
| Protein ID | pfu_aug2.0_3804.1_15862.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3804.1_15862.t1 MTVRDALNSAMDEEIQRDERVFLLGEEVALYDGAYKVSRGLHAKHGDKRVIDTPITEVIIVIDTSITEVMMVIDAPITEV VIVIDISITEVIIVIDTPITEVIIVIDTSITEMGFAGIAVGAAMVINSAAKTFYMSAGTVPVPITFRGPNGAAAGVAAQH SQCFAAWYSHCPGLKVVSPFNSEDCKGLLKSAIRDPNPVVVLENEIMYGSSFEMSDEALSPDFVIPIGKCKIERQGNKFE NSETIR |
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