Gene
| Gene Model ID | pfu_aug2.0_3804.1_15863 |
|---|---|
| Locus | scaffold3804.1 : 16876 ... 38765 : - |
| To GenomeBrowser | scaffold3804.1:16876..38765 |
| Genes list of scaffold | scaffold3804.1 |
| Synonym | pfu_aug1.0_6610.1_60069 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3804.1_15863.t1 | 2 | 1 | MSC | 307 | 329 | 1.3e-26 | 93.1 | 0.2 | 970.0 | -1.8 |
| pfu_aug2.0_3804.1_15863.t1 | 2 | 2 | MSC | 365 | 618 | 1.3e-26 | 93.1 | 7.7e-30 | 3.8e-26 | 91.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3804.1_15863.t1 | gi|524914134|ref|XP_005111886.1| | PREDICTED: inner nuclear membrane protein Man1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_3804.1_15863.t1 | gi|676449904|ref|XP_009052205.1| | hypothetical protein LOTGIDRAFT_226827 [Lottia gigantea] | 3.99931e-42 |
| pfu_aug2.0_3804.1_15863.t1 | gi|645001761|ref|XP_008209670.1| | PREDICTED: LOW QUALITY PROTEIN: inner nuclear membrane protein Man1 [Nasonia vitripennis] | 9.99995e-41 |
| pfu_aug2.0_3804.1_15863.t1 | gi|383855184|ref|XP_003703097.1| | 1.0e-39 | |
| pfu_aug2.0_3804.1_15863.t1 | gi|572318058|ref|XP_006624607.1| | PREDICTED: inner nuclear membrane protein Man1-like [Apis dorsata] | 2.0e-39 |
Transcript
| Transcript ID | pfu_aug2.0_3804.1_15863.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3804.1_15863.t1 atgcatgctagggcacttctatttatagaagcccttttttcttcgattccaaatttagaactttcttcctacgcatgcct gactgaagacgagttccggcgaaacatggcggagaagttgactgacgccgaaatcgcggaagaattaaagcggcacggcg aatctgttaagcttccgatcgacaggaagaagcgacccatactcataaaaaagctcaatcattttagggctcgagagagg ccaagtccttcaaagaaatccaccgcgagacaaaagacagtagaagttgagttcagctccgaagaaagtgaagaagagga aactcggtctaattcgacaataggtagaatactcggcaagaggaaaaaggacgaccctacccctccatactcaaacacag atacgatagaaatatcccctcccagaaggtctacccgtgctagcagaaatgaatcgaatatttcagtaactcgaagagga gcagcagcatcacccaggtcgctatatcctgatctgagtgaatttgtcactaccactcgccatcacgacaaaagttatag tggaaataacattaaggtagacgagactttagattaccaggaagaattcacagacacagatcctgaaggggaggaggaga gcatatatgaagttgaaaacagatccatcaatacaacattttctttgcatggaaatattgaggatttactcaaagcaann nnnnnnnntctgcatggaaatattgaggatgtagattcgaagccctcatcctcaagggcaacaaggcggagcactggatt aaatcagactttgcgatcaaagctaaatgcctctgttgccaatcattcatcagttactcaaagcaatccaaaggaagatt ggaatgaaagtcaaaagtttaagcccgcaagagcatcatttatatctactgcaattctcatcattgttggaatatttttc tttatcttagcagcatcatatgtctacatccgtaaggacataaatcttagtggcagcataacaggttactctggaacgta tgaagacaactttggatgtggaaatattccagaaaatgaatgtgcagacattaaaaatgtttcactgcaagctgttcatg aattagcacagattttgaaaaagaaatcagggaaagtaaaggttgatagagtgaagaaagatgtgatcaataagcttggt gttaaagaatcggctaaagagaaagtagaaagattggccatgatattcatattacagaatcctcactggaacatcagagc gtacgatacacaagaaaatcctgtgtcagattatacaaaagaagtgaaggttgacttgcttgagtctgaccctgaccttg actttataactagactgggaagagcgtacgatacacaagaaaatcctgtgtcagattatacaaaagaagtgaaggtggac ttgcttgagtctgaccctgaccttgactttataactagactgggaaggtcaatatggaggattctatttggactaatgct gttgctaatttgtattttgtgcatggcgctaggaattcttgtatggagaaatcacaataaaacaaaagcagaggagcagc agaaggtgtttaagcttgtggatgatatcatagagttaatagagaagaattatgagcatcatcaagaggattcccgtaca cctccttatatggctgtgtcacatgtcagagatcagcttattgtaccaaaacagagacatacaatgcgacctttatggaa taaagctgtgaaatttatcgaggccaacgagtccagaattcgtatagagacacagtccgtacagggagaggactttgaag tctggaggtggctaccgccaagctctaatggtggtaaagtctggcaaggtcaagcatttggtgagaacaattcccctagc ggtgcccttcattacagtcccacaccatgtctgaagatcagaaatatgtttgatgctgaagtacgagtatag |
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Protein
| Protein ID | pfu_aug2.0_3804.1_15863.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3804.1_15863.t1 MHARALLFIEALFSSIPNLELSSYACLTEDEFRRNMAEKLTDAEIAEELKRHGESVKLPIDRKKRPILIKKLNHFRARER PSPSKKSTARQKTVEVEFSSEESEEEETRSNSTIGRILGKRKKDDPTPPYSNTDTIEISPPRRSTRASRNESNISVTRRG AAASPRSLYPDLSEFVTTTRHHDKSYSGNNIKVDETLDYQEEFTDTDPEGEEESIYEVENRSINTTFSLHGNIEDLLKAX XXXLHGNIEDVDSKPSSSRATRRSTGLNQTLRSKLNASVANHSSVTQSNPKEDWNESQKFKPARASFISTAILIIVGIFF FILAASYVYIRKDINLSGSITGYSGTYEDNFGCGNIPENECADIKNVSLQAVHELAQILKKKSGKVKVDRVKKDVINKLG VKESAKEKVERLAMIFILQNPHWNIRAYDTQENPVSDYTKEVKVDLLESDPDLDFITRLGRAYDTQENPVSDYTKEVKVD LLESDPDLDFITRLGRSIWRILFGLMLLLICILCMALGILVWRNHNKTKAEEQQKVFKLVDDIIELIEKNYEHHQEDSRT PPYMAVSHVRDQLIVPKQRHTMRPLWNKAVKFIEANESRIRIETQSVQGEDFEVWRWLPPSSNGGKVWQGQAFGENNSPS GALHYSPTPCLKIRNMFDAEVRV |
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