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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_3808.1_29184
Locus scaffold3808.1 : 18344 ... 22075 : -
To GenomeBrowser scaffold3808.1:18344..22075
Genes list of scaffold scaffold3808.1
Synonym pfu_aug1.0_2186.1_66219

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_3808.1_29184.t1 1 1 7tm_1 52 313 4.1e-21 75.2 2.8e-24 5.2e-21 74.9

Transcript
Transcript IDpfu_aug2.0_3808.1_29184.t1
Definition-
>pfu_aug2.0_3808.1_29184.t1
atgagtgaagtcagcaatacgtcaattaacgagacgtatctccagaacggatcgcatcttgatctccccaaggacgacta
tcaagtagtaattgtcattctttcgcgtcttcagaaatatacaaatccagtattctgtatattaggactccttggaaatg
tgattgcagccactgtctttctaagtaattcacagaggaagacgtcttgcagtttatatcttgccgcgcgatcggtgtct
gattccggctttctgatagctttattcgttgtttggctcagtgatattggtataccagcgttcaattatgacgtcatctg
tcaactgatcatatttttgacatacttctgtggttttctgtctgtttggttcgtcgttgcgctgacaacagaaaacttcg
tccgcatttgtcacccgttctcggtaaataagtactgcacaactaaaattgcgaaaatagtcatctttgcctttgtcgta
atagccttggcactgtacaactttcctctttggaccaataaagtggtgaataacaatggaactatggtttgctcaaggat
accaaaatatgacgttgttcagcaagcccttaactacacagatactctccttacgcttgtcatccccataagcatcatca
tatgcctcatggtcactatcacggtaaatgtcatacagacttatcatcgacaacgacgcttgaaaggcaatcgaagggac
attaagtccaaaaatccacaaggtcaagtgactaaaatgctcttctcggtatctttgattttcattgttctaaatttacc
cagccacgccataagagtgtacagcacagtatcccagttggtgttcggtatgacagaagtatcagtgctagaaaggtcaa
tgcattttgcattttacacattatattacatgaattttgcggtcaatatactactgtacttagtgttcggacctaaattt
cgagaggaatttatgcgaatatttctaagaaggagcaaacaacgtaatgaattgacattgatgggtagtgaaaaaagaac
tctattggagtcacctgagcaagtcacacacttataa

Protein
Protein IDpfu_aug2.0_3808.1_29184.t1
Definition-
>pfu_aug2.0_3808.1_29184.t1
MSEVSNTSINETYLQNGSHLDLPKDDYQVVIVILSRLQKYTNPVFCILGLLGNVIAATVFLSNSQRKTSCSLYLAARSVS
DSGFLIALFVVWLSDIGIPAFNYDVICQLIIFLTYFCGFLSVWFVVALTTENFVRICHPFSVNKYCTTKIAKIVIFAFVV
IALALYNFPLWTNKVVNNNGTMVCSRIPKYDVVQQALNYTDTLLTLVIPISIIICLMVTITVNVIQTYHRQRRLKGNRRD
IKSKNPQGQVTKMLFSVSLIFIVLNLPSHAIRVYSTVSQLVFGMTEVSVLERSMHFAFYTLYYMNFAVNILLYLVFGPKF
REEFMRIFLRRSKQRNELTLMGSEKRTLLESPEQVTHL

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