Gene
| Gene Model ID | pfu_aug2.0_381.1_04076 |
|---|---|
| Locus | scaffold381.1 : 38636 ... 50442 : + |
| To GenomeBrowser | scaffold381.1:38636..50442 |
| Genes list of scaffold | scaffold381.1 |
| Synonym | pfu_aug1.0_2813.1_59035 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ubiquitin carboxyl-terminal hydrolase partial | GO:0016787 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_381.1_04076.t1 | 1 | 1 | Peptidase_C12 | 28 | 231 | 0.0 | 201.7 | 0.0 | 0.0 | 200.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_381.1_04076.t1 | gi|676458195|ref|XP_009054896.1| | hypothetical protein LOTGIDRAFT_175432 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_381.1_04076.t1 | gi|697029525|ref|XP_009576759.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase BAP1, partial [Fulmarus glacialis] | 0.0 |
| pfu_aug2.0_381.1_04076.t1 | gi|698408412|ref|XP_009708621.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase BAP1, partial [Cariama cristata] | 0.0 |
| pfu_aug2.0_381.1_04076.t1 | gi|704458313|ref|XP_010076508.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase BAP1, partial [Pterocles gutturalis] | 0.0 |
| pfu_aug2.0_381.1_04076.t1 | gi|726996614|ref|XP_010388643.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase BAP1 [Corvus cornix cornix] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_381.1_04076.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_381.1_04076.t1 atgtattgtaaacccatatggcacctgaaaccaagagatatcttctacaagtcctgcttacaagactccagtactgctga cacaccacgattatttactcttttattggaagacataggtgtaaaaggtgtacaggttgaagaaatctatgatttgcaga aaacaatagatggccctgtgtatggattcattttcttgtttcgatggatagaagaaaggaggagtagaaggaagacaaca acagaggatgaatcatttgtccaggatcaacaagttgtcaataagatcttctttgctcagcaggtgatacctaattcgtg cgctacgcatgcattattgagtgtgctcctgaactgtgatgacagagttaaacttggatctacgttatcacagctgaaag aattctcaaagaacatgagtccagaggacaaaggtgtggccatagggaacatgccagagctggccgccgcccataacagc cacgccagacctgagccacggcatcctccagagaaacagcaaggattaacaacagctcgaaccatggaggctttccactt tgttagttatgttcctatagaaggcagactgtatgagttagatggtctgaagccttatcccatagaccatggaccgtggg agaaaggagaatactggacagagaagttccgaagagtaattacagaacgactaggaatggcaactggaggagagccatat catgacatacgattcaacctgatggctgttgttccggataaaaggtcactgtacgaacacaaactggccactcttaaaac aaatcgacagattgtactagaaacgctccaacagatggtaaaagtaacaaacccaggattgacctcggcagacaaagata aatatttggcagcagtacggcagcaaaaccgttatccctcggaatcctccatgagagaaacagggtcgacgtccgggtat agtgaaggaagtgactttagtaagactgacagtccgctatctgtgtcaagtgctcatagttctatccccgacactggcgt aacgtcacagtctgacacagcctttagtgacagcaaaaactcacaaaatacgtgcttgtcaagtgaagacacaagtcagg aaaatgttcccatggagacagattttaagagttctgataatatgacggatcttagtgtatttgatcaacctcaatcaact agaattgtacagacgagtgaaaatcagacagcagattcttttaaatctataagtgcagacaattccggagtcgtgaaaag tgaaatgacagatacccaagtagcaggaccgtcagatgttacccagcctctgacaatagaaactaaatatagcggtatat catcaggaccgagtagtgagagtacggacacagcatcggaggtaggaagctgcttcagctccccaaacagtggaagtaac tcctgtcagaacagcccacaaacaggcaccgacagatcagatgagtccagatcccgtaaagaaggagaaggaagtggcca tggaaggaagaggaagttaagcagcaatcaggctttttctcctaaggatttgttagctctactgaagaatgtagagaatg agataaaactctgtgaagccaaccttaaagacgaactagagaaaagaaggaaataccagattgacgactgtcggaggaca cataactacgaccagtttatatgtacatttctgtcgatgctcgccaaggaaggacatctagccgatctcgttgaaaaaca ctccctcatcaaaaaacggacaaatgtcagtgctggtcgtctgggaaaactaggatctgccctggacagacgaaggccaa gacctaacagacggagatag |
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Protein
| Protein ID | pfu_aug2.0_381.1_04076.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_381.1_04076.t1 MYCKPIWHLKPRDIFYKSCLQDSSTADTPRLFTLLLEDIGVKGVQVEEIYDLQKTIDGPVYGFIFLFRWIEERRSRRKTT TEDESFVQDQQVVNKIFFAQQVIPNSCATHALLSVLLNCDDRVKLGSTLSQLKEFSKNMSPEDKGVAIGNMPELAAAHNS HARPEPRHPPEKQQGLTTARTMEAFHFVSYVPIEGRLYELDGLKPYPIDHGPWEKGEYWTEKFRRVITERLGMATGGEPY HDIRFNLMAVVPDKRSLYEHKLATLKTNRQIVLETLQQMVKVTNPGLTSADKDKYLAAVRQQNRYPSESSMRETGSTSGY SEGSDFSKTDSPLSVSSAHSSIPDTGVTSQSDTAFSDSKNSQNTCLSSEDTSQENVPMETDFKSSDNMTDLSVFDQPQST RIVQTSENQTADSFKSISADNSGVVKSEMTDTQVAGPSDVTQPLTIETKYSGISSGPSSESTDTASEVGSCFSSPNSGSN SCQNSPQTGTDRSDESRSRKEGEGSGHGRKRKLSSNQAFSPKDLLALLKNVENEIKLCEANLKDELEKRRKYQIDDCRRT HNYDQFICTFLSMLAKEGHLADLVEKHSLIKKRTNVSAGRLGKLGSALDRRRPRPNRRR |
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