Gene
| Gene Model ID | pfu_aug2.0_381.1_04077 |
|---|---|
| Locus | scaffold381.1 : 51372 ... 66405 : - |
| To GenomeBrowser | scaffold381.1:51372..66405 |
| Genes list of scaffold | scaffold381.1 |
| Synonym | pfu_aug1.0_12284.1_61022 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 26s proteasome non-atpase regulatory subunit 6 | GO:0022624 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_381.1_04077.t3 | 1 | 1 | RPN7 | 26 | 199 | 0.0 | 202.4 | 0.0 | 0.0 | 201.9 |
| pfu_aug2.0_381.1_04077.t3 | 1 | 1 | PCI | 215 | 317 | 4.4e-16 | 59.1 | 2.2e-19 | 1.1e-15 | 57.8 |
Transcript
| Transcript ID | pfu_aug2.0_381.1_04077.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_381.1_04077.t1 atggcaccatattatgaggatctatgtaaaagtttgagctggaaatgtgacgataaactgctaaaaaagatgaaagacgt taacacagctgagcttaagaagctagatgattctattgaagatgcagagaaaaatctgggagaaacagaagttcgagaat tcatgttgaagaaagctgaatatttatgtaaaattggtgataaggaggcagcgttaagccagttccggaaaacccaggag aaaacagtcaccctgggttacagactggacctagtgttccaccttatacgtatgggtttattctacatggaccatgatct cataaacaggaacctggaaaaggcacagagtttgatagatgagggaggggactgggacaggaggaatcgtcttaaggtat acagaggtatttactgtatgtctatacgggacttcaaacaagcagcgggactcttcctagacactgttgccacgtttaca tcgtatgagctaatggactacccaaccttcgtcacttatactgtattctgtagtatgatagccttagaaagaccagaact cagagaaaaggttgttaagggatcagagatattagaagtattacacagtttacctaaaatcaggaatttcctattttctc tatatgattgtcattatggtgaattcttcagaatgttagcccaggtagaggaccagatgaagtatgacagatttctagct ccacattatagatattacaccagagaaatgcgtattatagcgtatactcagctcctggagtcatatagaagcttggcctt ggactatatggcccaggcctttggtgttactgtagagtttattgatcaagagctagctagatttatagctgcagggagat tacattgtaagatagataaagtaggagggatagtagaaacaaaccgcccagacagcaaaaactggcaatatcaggcaacg ataaaacaaggagatattcttcttaacagaattcagaagctgagccgagtaatcaatatctga |
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| Transcript ID | pfu_aug2.0_381.1_04077.t2 |
| Definition | - |
>pfu_aug2.0_381.1_04077.t2 atgccgatcgagaacttagaagaacaggggctcgagaaaaaccctgattttgacctagcacagtggagtataccggcagt catgactgctgatatggcaccatattatgaggatctatgtaaaagtttgagctggaaatgtgacgataaactgctaaaaa agatgaaagacgttaacacagctgagcttaagaagctagatgattctattgaagatgcagagaaaaatctgggagaaaca gaagttcgagaattcatgttgaagaaagctgaatatttatgtaaaattggtgataaggaggcagcgttaagccagttccg gaaaacccaggagaaaacagtcaccctgggttacagactggacctagtgttccaccttatacgtatgggtttattctaca tggaccatgatctcataaacaggaacctggaaaaggcacagagtttgatagatgagggaggggactgggacaggaggaat cgtcttaaggtatacagaggtatttactgtatgtctatacgggacttcaaacaagcagcgggactcttcctagacactgt tgccacgtttacatcgtatgagctaatggactacccaaccttcgtcacttatactgtattctgtagtatgatagccttag aaagaccagaactcagagaaaaggttgttaagggatcagagatattagaagtattacacagtttacctaaaatcaggaat ttcctattttctctatatgattgtcattatggtgaattcttcagaatgttagcccaggtagaggaccagatgaagtatga cagatttctagctccacattatagatattacaccagagaaatgcgtattatagcgtatactcagctcctggagtcatata gaagcttggccttggactatatggcccaggcctttggtgttactgtagagtttattgatcaagagctagctagatttata gctgcagggagattacattgtaagatagataaagtaggagggatagtagaaacaaaccgcccagacagcaaaaactggca atatcaggcaacgataaaacaaggagatattcttcttaacagaattcagaagctgagccgagtaatcaatatctga |
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| Transcript ID | pfu_aug2.0_381.1_04077.t3 |
| Definition | - |
>pfu_aug2.0_381.1_04077.t3 atgggcggttcagattacagaacagatatggcaccatattatgaggatctatgtaaaagtttgagctggaaatgtgacga taaactgctaaaaaagatgaaagacgttaacacagctgagcttaagaagctagatgattctattgaagatgcagagaaaa atctgggagaaacagaagttcgagaattcatgttgaagaaagctgaatatttatgtaaaattggtgataaggaggcagcg ttaagccagttccggaaaacccaggagaaaacagtcaccctgggttacagactggacctagtgttccaccttatacgtat gggtttattctacatggaccatgatctcataaacaggaacctggaaaaggcacagagtttgatagatgagggaggggact gggacaggaggaatcgtcttaaggtatacagaggtatttactgtatgtctatacgggacttcaaacaagcagcgggactc ttcctagacactgttgccacgtttacatcgtatgagctaatggactacccaaccttcgtcacttatactgtattctgtag tatgatagccttagaaagaccagaactcagagaaaaggttgttaagggatcagagatattagaagtattacacagtttac ctaaaatcaggaatttcctattttctctatatgattgtcattatggtgaattcttcagaatgttagcccaggtagaggac cagatgaagtatgacagatttctagctccacattatagatattacaccagagaaatgcgtattatagcgtatactcagct cctggagtcatatagaagcttggccttggactatatggcccaggcctttggtgttactgtagagtttattgatcaagagc tagctagatttatagctgcagggagattacattgtaagatagataaagtaggagggatagtagaaacaaaccgcccagac agcaaaaactggcaatatcaggcaacgataaaacaaggagatattcttcttaacagaattcagaagctgagccgagtaat caatatctga |
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Protein
| Protein ID | pfu_aug2.0_381.1_04077.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_381.1_04077.t1 MAPYYEDLCKSLSWKCDDKLLKKMKDVNTAELKKLDDSIEDAEKNLGETEVREFMLKKAEYLCKIGDKEAALSQFRKTQE KTVTLGYRLDLVFHLIRMGLFYMDHDLINRNLEKAQSLIDEGGDWDRRNRLKVYRGIYCMSIRDFKQAAGLFLDTVATFT SYELMDYPTFVTYTVFCSMIALERPELREKVVKGSEILEVLHSLPKIRNFLFSLYDCHYGEFFRMLAQVEDQMKYDRFLA PHYRYYTREMRIIAYTQLLESYRSLALDYMAQAFGVTVEFIDQELARFIAAGRLHCKIDKVGGIVETNRPDSKNWQYQAT IKQGDILLNRIQKLSRVINI |
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| Protein ID | pfu_aug2.0_381.1_04077.t2 |
| Definition | - |
>pfu_aug2.0_381.1_04077.t2 MPIENLEEQGLEKNPDFDLAQWSIPAVMTADMAPYYEDLCKSLSWKCDDKLLKKMKDVNTAELKKLDDSIEDAEKNLGET EVREFMLKKAEYLCKIGDKEAALSQFRKTQEKTVTLGYRLDLVFHLIRMGLFYMDHDLINRNLEKAQSLIDEGGDWDRRN RLKVYRGIYCMSIRDFKQAAGLFLDTVATFTSYELMDYPTFVTYTVFCSMIALERPELREKVVKGSEILEVLHSLPKIRN FLFSLYDCHYGEFFRMLAQVEDQMKYDRFLAPHYRYYTREMRIIAYTQLLESYRSLALDYMAQAFGVTVEFIDQELARFI AAGRLHCKIDKVGGIVETNRPDSKNWQYQATIKQGDILLNRIQKLSRVINI |
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| Protein ID | pfu_aug2.0_381.1_04077.t3 |
| Definition | - |
>pfu_aug2.0_381.1_04077.t3 MGGSDYRTDMAPYYEDLCKSLSWKCDDKLLKKMKDVNTAELKKLDDSIEDAEKNLGETEVREFMLKKAEYLCKIGDKEAA LSQFRKTQEKTVTLGYRLDLVFHLIRMGLFYMDHDLINRNLEKAQSLIDEGGDWDRRNRLKVYRGIYCMSIRDFKQAAGL FLDTVATFTSYELMDYPTFVTYTVFCSMIALERPELREKVVKGSEILEVLHSLPKIRNFLFSLYDCHYGEFFRMLAQVED QMKYDRFLAPHYRYYTREMRIIAYTQLLESYRSLALDYMAQAFGVTVEFIDQELARFIAAGRLHCKIDKVGGIVETNRPD SKNWQYQATIKQGDILLNRIQKLSRVINI |
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