Gene
| Gene Model ID | pfu_aug2.0_381.1_04079 |
|---|---|
| Locus | scaffold381.1 : 78997 ... 86105 : - |
| To GenomeBrowser | scaffold381.1:78997..86105 |
| Genes list of scaffold | scaffold381.1 |
| Synonym | pfu_aug1.0_25581.1_69720 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_381.1_04079.t1 | 1 | 1 | Fibrinogen_C | 41 | 247 | 0.0 | 162.1 | 0.0 | 0.0 | 161.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_381.1_04079.t1 | gi|524891478|ref|XP_005102272.1| | PREDICTED: angiopoietin-related protein 6-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_381.1_04079.t1 | gi|675703723|ref|XP_008960172.1| | PREDICTED: angiopoietin-related protein 6 [Pan paniscus] | 4.00001e-40 |
| pfu_aug2.0_381.1_04079.t1 | gi|71834598|ref|NP_001025401.1| | angiopoietin-like 2b precursor [Danio rerio] | 8.99999e-40 |
| pfu_aug2.0_381.1_04079.t1 | gi|426387160|ref|XP_004060042.1| | PREDICTED: angiopoietin-related protein 6 [Gorilla gorilla gorilla] | 1.0e-39 |
| pfu_aug2.0_381.1_04079.t1 | gi|410922148|ref|XP_003974545.1| | 1.0e-39 |
Transcript
| Transcript ID | pfu_aug2.0_381.1_04079.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_381.1_04079.t1 atggtatgcaaaatagctacctatttaaccttgctgttagcaattgtaagttgctgtattggggttgtgtttggagcaaa actaaaattcaagggtataaacaaaggagaatttaaattcaaggattgtgaccaaatcagacaggccgggtacatcgagt cgggaatctacacactgtggagggatgacaataactccttcaaggtccactgtcaacatgaagccaacaactcctttaca ctcatccagaggcgtgttgacggtagcgtcaacttcgctcagccatggcacatataccagactgggtttggtagcgaaaa cagcaactactgggccggactaaacacgatatactacctgacatatacaggtcataccgtcctgagcataaccatgcaag actggaataacaatatcagaactgcccactactcgtacttcaagcttcaagattccgaccactacactctgtctatcgga ggatacaggggtgacgtacctgatgacctcagctataataatggcacaaggtttgccacatacgacaaccctgacactca cctttgtgtgaactatcagcacgctgggtggtggtataattactgtacatacgccctacctaacggcaaatactactaca atggacgttaccctccgtcgggaggttggtatgacggaatatactggagtgactggatggggtacaactactcgttaaag tatattagtatgactctgtcaaaatcctga |
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Protein
| Protein ID | pfu_aug2.0_381.1_04079.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_381.1_04079.t1 MVCKIATYLTLLLAIVSCCIGVVFGAKLKFKGINKGEFKFKDCDQIRQAGYIESGIYTLWRDDNNSFKVHCQHEANNSFT LIQRRVDGSVNFAQPWHIYQTGFGSENSNYWAGLNTIYYLTYTGHTVLSITMQDWNNNIRTAHYSYFKLQDSDHYTLSIG GYRGDVPDDLSYNNGTRFATYDNPDTHLCVNYQHAGWWYNYCTYALPNGKYYYNGRYPPSGGWYDGIYWSDWMGYNYSLK YISMTLSKS |
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