Gene
| Gene Model ID | pfu_aug2.0_381.1_04080 |
|---|---|
| Locus | scaffold381.1 : 86152 ... 90095 : - |
| To GenomeBrowser | scaffold381.1:86152..90095 |
| Genes list of scaffold | scaffold381.1 |
| Synonym | pfu_aug1.0_105192.1_71558 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_381.1_04080.t1 | 1 | 1 | Fibrinogen_C | 2 | 118 | 5.8e-22 | 78.4 | 4.4e-26 | 6.5e-22 | 78.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_381.1_04080.t1 | gi|260829363|ref|XP_002609631.1| | hypothetical protein BRAFLDRAFT_59294 [Branchiostoma floridae] | 4.0e-20 |
| pfu_aug2.0_381.1_04080.t1 | gi|260788726|ref|XP_002589400.1| | hypothetical protein BRAFLDRAFT_218195 [Branchiostoma floridae] | 5.0e-17 |
| pfu_aug2.0_381.1_04080.t1 | gi|736163092|ref|XP_010793979.1| | PREDICTED: angiopoietin-related protein 2-like, partial [Notothenia coriiceps] | 2.0e-16 |
| pfu_aug2.0_381.1_04080.t1 | gi|260793382|ref|XP_002591691.1| | hypothetical protein BRAFLDRAFT_223563 [Branchiostoma floridae] | 2.0e-16 |
Transcript
| Transcript ID | pfu_aug2.0_381.1_04080.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_381.1_04080.t1 atgttagactggaataatacgtacaagtttgcccgctactcccatttctatcttacagaccaagaacaatacactctgtc tatcggaggatacagcggtaacgtacatgatgacctcagctataataacggcaggaggtttgccacgtacgacaagcccg acacgtaccgctgtgctgagaatcagcacggtgggtggtggtactggtactgtacatacgccctccctaacggtaaatac tactataacggatcttatcccccggacccgtcagggaggtggtttgacggtatattctggagcgactggacagggtacgg gtactcattaaagtatatcagtatgagcctatcaaaaacctga |
|
Protein
| Protein ID | pfu_aug2.0_381.1_04080.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_381.1_04080.t1 MLDWNNTYKFARYSHFYLTDQEQYTLSIGGYSGNVHDDLSYNNGRRFATYDKPDTYRCAENQHGGWWYWYCTYALPNGKY YYNGSYPPDPSGRWFDGIFWSDWTGYGYSLKYISMSLSKT |
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