Gene
| Gene Model ID | pfu_aug2.0_381.1_04081 |
|---|---|
| Locus | scaffold381.1 : 90196 ... 110324 : + |
| To GenomeBrowser | scaffold381.1:90196..110324 |
| Genes list of scaffold | scaffold381.1 |
| Synonym | pfu_aug1.0_19652.1_54597 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_381.1_04081.t1 | 2 | 1 | PID | 275 | 403 | 8.5e-22 | 77.6 | 3.3e-25 | 9.8e-22 | 77.4 |
| pfu_aug2.0_381.1_04081.t1 | 1 | 1 | PTB | 277 | 395 | 7.0e-06 | 25.9 | 6.1e-09 | 1.8e-05 | 24.6 |
| pfu_aug2.0_381.1_04081.t1 | 2 | 2 | PID | 415 | 434 | 8.5e-22 | 77.6 | 0.93 | 2800.0 | -1.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_381.1_04081.t1 | gi|524878124|ref|XP_005095752.1| | PREDICTED: DCC-interacting protein 13-alpha-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_381.1_04081.t1 | gi|658848208|ref|XP_008406612.1| | PREDICTED: DCC-interacting protein 13-alpha [Poecilia reticulata] | 0.0 |
| pfu_aug2.0_381.1_04081.t1 | gi|617472191|ref|XP_007575784.1| | PREDICTED: DCC-interacting protein 13-alpha [Poecilia formosa] | 0.0 |
| pfu_aug2.0_381.1_04081.t1 | gi|390359964|ref|XP_784602.3| | PREDICTED: DCC-interacting protein 13-alpha [Strongylocentrotus purpuratus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_381.1_04081.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_381.1_04081.t1 atgggtcaggatgctgtagcaaagacagaaattgaggaattcctcaacaacatatcaagtagtgtccagggtgtgcaaca agaactacaacaagataccaagaagacagtggagttaatagacacgctagaacaacagagtgcccataaataccacgctg agcccccagtagatatgccatatataccccctaacacctcactcaaccagaaagccggttatctattcttacgcaagttc agtgttacatttatagactggctttatagaggagagatcctagtccataaactacttgcgggtagtttggtcttagatct taacgagccaggtgtacttgctgaaccatatgattctgacgataggagatttgtatttcaagtcatatcgcccaagtcaa aaaaaaatgtggtactgcaggctgaaaatgaaagagataaagatgagtggatatgcacaatcaacaatgtagttagagag agtggttatgtcaagggtaaaagcccacaagtcaaacctaaggagagaacgtcaagttctagcagtcagtccaagcaatc agagtccagtagtcctgatgccatcagtgttaatagtgccagcagtgcatccgcaccaagaactccggccccaacgccta caaactcattcattcctgacgccccaataatgtttgatatgccctcagttgtagaggaaaacggaggggttgtgtcaaac ctctcaggtccaccaaaaaggatcaacccgtttgaccagtcgtctgtagaagtactggacacactggacgcagccattga tgactctacgtatgtagagagttttgttgtgaggtttctgggctccatggctgtgactacagacaggggtgaacagctag tatgtgagacaatgaggcagattttggcagctagagccgttaacaatgtgttcaaaatggtggagtcacgactcgttgtg tccagtgaatgtatgaggttggttgatccatcatcgaatgccgttagaacaaagtttgccttagctgatatatcattctg gtcggctcacccagaaaataccagattgtttgggtttataactagaacaaagagctcagggtctacttcgtcacagtttg cgtgtcacgtgtttgaatgtaacgtatcggcagaggagatttgccaggcggttggtacggccaccaagctagcttttcag gccttaatgcaaagtaagttgcacgaagggaaggagaaaaaagccatggagaaaatacaacaggtgaaaactaaagagaa gaacctcctcctccaaaacatcaaccagctagaggatgcccctgagggtgaggaggaggctctacataacctcccactgt cccctgatggcaagtatctggtcctcaccgcaaccgacgaatcagatatcatccccgagtcacatgagactgaacaacca ataaaaacaatggaccttagaaatacttcaaaccagacacaagaatctacaagtgtggctgacgatgatgaaactgaggc ttaa |
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Protein
| Protein ID | pfu_aug2.0_381.1_04081.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_381.1_04081.t1 MGQDAVAKTEIEEFLNNISSSVQGVQQELQQDTKKTVELIDTLEQQSAHKYHAEPPVDMPYIPPNTSLNQKAGYLFLRKF SVTFIDWLYRGEILVHKLLAGSLVLDLNEPGVLAEPYDSDDRRFVFQVISPKSKKNVVLQAENERDKDEWICTINNVVRE SGYVKGKSPQVKPKERTSSSSSQSKQSESSSPDAISVNSASSASAPRTPAPTPTNSFIPDAPIMFDMPSVVEENGGVVSN LSGPPKRINPFDQSSVEVLDTLDAAIDDSTYVESFVVRFLGSMAVTTDRGEQLVCETMRQILAARAVNNVFKMVESRLVV SSECMRLVDPSSNAVRTKFALADISFWSAHPENTRLFGFITRTKSSGSTSSQFACHVFECNVSAEEICQAVGTATKLAFQ ALMQSKLHEGKEKKAMEKIQQVKTKEKNLLLQNINQLEDAPEGEEEALHNLPLSPDGKYLVLTATDESDIIPESHETEQP IKTMDLRNTSNQTQESTSVADDDETEA |
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