Gene
| Gene Model ID | pfu_aug2.0_381.1_04086 |
|---|---|
| Locus | scaffold381.1 : 212540 ... 274179 : - |
| To GenomeBrowser | scaffold381.1:212540..274179 |
| Genes list of scaffold | scaffold381.1 |
| Synonym | pfu_aug1.0_1930.1_00896 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| potassium voltage-gated channel protein shal-like | GO:0005249 GO:0008076 GO:0034765 GO:0051260 GO:0071805 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_381.1_04086.t1 | 1 | 1 | Shal-type | 2 | 29 | 1.7e-14 | 52.9 | 1.2e-17 | 3.0e-14 | 52.2 |
| pfu_aug2.0_381.1_04086.t1 | 1 | 1 | BTB_2 | 42 | 131 | 4.1e-27 | 94.2 | 4.7e-30 | 1.2e-26 | 92.7 |
| pfu_aug2.0_381.1_04086.t1 | 2 | 1 | Ion_trans_2 | 181 | 203 | 1.3e-11 | 44.0 | 0.22 | 540.0 | 0.3 |
| pfu_aug2.0_381.1_04086.t1 | 2 | 1 | Ion_trans | 183 | 199 | 1.8e-29 | 102.4 | 2.5 | 6200.0 | -3.8 |
| pfu_aug2.0_381.1_04086.t1 | 2 | 2 | Ion_trans | 228 | 402 | 1.8e-29 | 102.4 | 7.4e-33 | 1.8e-29 | 102.4 |
| pfu_aug2.0_381.1_04086.t1 | 2 | 2 | Ion_trans_2 | 329 | 404 | 1.3e-11 | 44.0 | 5.2e-15 | 1.3e-11 | 44.0 |
| pfu_aug2.0_381.1_04086.t1 | 1 | 1 | DUF3399 | 443 | 532 | 5.0e-21 | 74.8 | 6.3e-24 | 1.5e-20 | 73.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_381.1_04086.t1 | gi|524869908|ref|XP_005091742.1| | PREDICTED: potassium voltage-gated channel protein Shal-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_381.1_04086.t1 | gi|676468083|ref|XP_009058094.1| | hypothetical protein LOTGIDRAFT_105753 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_381.1_04086.t1 | gi|498932779|ref|XP_004519466.1| | PREDICTED: potassium voltage-gated channel protein Shal isoform X1 [Ceratitis capitata] | 0.0 |
| pfu_aug2.0_381.1_04086.t1 | gi|571508093|ref|XP_006571281.1| | PREDICTED: potassium voltage-gated channel protein Shal isoform X6 [Apis mellifera] | 0.0 |
| pfu_aug2.0_381.1_04086.t1 | gi|665790137|ref|XP_008560741.1| | PREDICTED: potassium voltage-gated channel protein Shal isoform X1 [Microplitis demolitor] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_381.1_04086.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_381.1_04086.t1 atggcatccgttgcagcctggcttccgtttgcgcgggcctcggccataggctgggttccggttgcacaaaacccacttcc gcaacccgtgttccgggcggaaaacaggaggggtgatgagaaagtgaccattaatgtaagcggtcggaaattcgaaacat ggcgaacaacgctcgaaaaatacccagataccctactaggatcaaatgaaaaggaatttttctacgacgacgatggaaaa gattatttctttgaccgtgatcccgagttgttcagacatatattaaattattataggactggaaaagtacactacccgaa acttgaatgtttggccgcgtacgatgaggaactcgcttttttcggaattcttcctgatttaatcggggattgttgttatg aagattacagggacagaaagagagaaaaccaagaacggttaatagatgacaaagattcggaaaatgaacatatggactct gcgaaaaccctcagggagcgaatgtggagggcttttgaaaatcctcatataggcacgacggctttagtattttactatgt aaccggcttctttatcgctgtatctgttatggcaaacgtagtagaaactatagaatgtggcacaatacctggaacgaacg aagttcaaagctgcgctgataagtatactctacattttttctgcttagacactgcttgcgtcattatattcaccgccgaa tacctgcttcgtctgtacgcggcccccgatcgttgtaaattcatgcgcagcattatgagcattatcgatgttgtggctat acttccgtactatataagtctggtgatttctgacaacgatgacgtcagcggagctttcgtcacgctgagggtattccgag tgtttaggatctttaaattttcgcggcattcacaaggattacgaattttaggttacactttgaaaagttgtgcaagcgag cttggatttttagtcttctctctaaccatggcggtgattatatttgccaccgttatttattatgcagagaaaaaggaaat tggctccaaatttacaagtatcccaatggcatcctggtatacaattgttaccatgacaaccctggggtacggtgacatgg taccaaatacagagatagggaaaatagtaggaggtttgtgctcaatttgtggtgtattggtcatagctttaccggtccct gtgatagtatctaactttagcagaatatatcatcaaagccagagagcagataaacgaaaagctcaaaagaaagcccgtat agctagaattaagatggctaaaaacgccagtggtgcggcctttattagtagtaagaagcgggcggaggaggccctgagag caaaagagagcgggctggaggtagacgattataaaccacaagatgttctagaaatgcaacaccatcatctcctcagttgt ctagagaaaaccacggatcgagaatttgttgaactagacatggcttttaatggagctctgactaaaccctcggagacccc accaccctccccggatccttccatatcgtctcttgatagacacaggaacaccggatgttgtgcaagaaggttctctccac atcgaagatttctcgtcaagaggaggaacacagactctgataacgatgatcttaatgatattcaaattcgacttccaact ttaaaccgttcatccagatcgaaccttaacgctgtgagcacatccacaccaaacagcaaatctaacaaccttacagtaac cacagctatcgttacattgcctacgccaagcactacaccggaaacggaatctgcgcatactcagagcacaagtggcacaa tgtcaccatctaatgcacaaatgcagaacccggattcgatcgtcagacagaccaagaccgcctgcatgttcctggaaaac aatgtcgatcgctctaagtacgggagtttgtctgtaaggacattgtag |
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Protein
| Protein ID | pfu_aug2.0_381.1_04086.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_381.1_04086.t1 MASVAAWLPFARASAIGWVPVAQNPLPQPVFRAENRRGDEKVTINVSGRKFETWRTTLEKYPDTLLGSNEKEFFYDDDGK DYFFDRDPELFRHILNYYRTGKVHYPKLECLAAYDEELAFFGILPDLIGDCCYEDYRDRKRENQERLIDDKDSENEHMDS AKTLRERMWRAFENPHIGTTALVFYYVTGFFIAVSVMANVVETIECGTIPGTNEVQSCADKYTLHFFCLDTACVIIFTAE YLLRLYAAPDRCKFMRSIMSIIDVVAILPYYISLVISDNDDVSGAFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSCASE LGFLVFSLTMAVIIFATVIYYAEKKEIGSKFTSIPMASWYTIVTMTTLGYGDMVPNTEIGKIVGGLCSICGVLVIALPVP VIVSNFSRIYHQSQRADKRKAQKKARIARIKMAKNASGAAFISSKKRAEEALRAKESGLEVDDYKPQDVLEMQHHHLLSC LEKTTDREFVELDMAFNGALTKPSETPPPSPDPSISSLDRHRNTGCCARRFSPHRRFLVKRRNTDSDNDDLNDIQIRLPT LNRSSRSNLNAVSTSTPNSKSNNLTVTTAIVTLPTPSTTPETESAHTQSTSGTMSPSNAQMQNPDSIVRQTKTACMFLEN NVDRSKYGSLSVRTL |
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