Gene
| Gene Model ID | pfu_aug2.0_3819.1_32557 |
|---|---|
| Locus | scaffold3819.1 : 1216 ... 10344 : + |
| To GenomeBrowser | scaffold3819.1:1216..10344 |
| Genes list of scaffold | scaffold3819.1 |
| Synonym | pfu_aug1.0_791.1_43827 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3819.1_32557.t1 | 3 | 1 | MBF1 | 5 | 58 | 4.5e-20 | 71.4 | 1.4e-15 | 2.0e-12 | 46.9 |
| pfu_aug2.0_3819.1_32557.t1 | 3 | 2 | MBF1 | 64 | 95 | 4.5e-20 | 71.4 | 1.1e-10 | 1.7e-07 | 31.1 |
| pfu_aug2.0_3819.1_32557.t1 | 1 | 1 | HTH_31 | 100 | 151 | 3.2e-06 | 27.2 | 4.5e-09 | 6.7e-06 | 26.2 |
| pfu_aug2.0_3819.1_32557.t1 | 1 | 1 | HTH_3 | 103 | 152 | 2.0e-13 | 49.9 | 2.2e-16 | 3.3e-13 | 49.2 |
| pfu_aug2.0_3819.1_32557.t1 | 3 | 3 | MBF1 | 119 | 124 | 4.5e-20 | 71.4 | 2.0 | 3000.0 | -1.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3819.1_32557.t1 | gi|524894128|ref|XP_005103567.1| | PREDICTED: endothelial differentiation-related factor 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_3819.1_32557.t1 | gi|241742037|ref|XP_002414153.1| | transcription factor Mbf1, putative [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_3819.1_32557.t1 | gi|675856354|ref|XP_009013737.1| | hypothetical protein HELRODRAFT_110237 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_3819.1_32557.t1 | gi|260799776|ref|XP_002594860.1| | hypothetical protein BRAFLDRAFT_124447 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_3819.1_32557.t1 | gi|585667809|ref|XP_002735440.2| | PREDICTED: LOW QUALITY PROTEIN: endothelial differentiation-related factor 1 homolog [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_3819.1_32557.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3819.1_32557.t1 atggcagaagcagactggagtgaagtaacatacatcggcaagaaaccaccaaaaggtggtcaactgcggtcgcagcaggc aattaatgctgcaaaaagaagtggcgcagaaattgaaacaacaaaaaatatgagctcagacagacagtcagatagacaga catatggacagagagcagacactgcagcaactaaatacgatgctggtcataatagaaacaaaaccattgacaagaataca gccaaactagaccgggagactgaggaactccaccacgataccgttacgttggatgtgtctcgccttatccagcaaggaag acaagccaagggtctgactcagaaagaactggctacaaaaattaatgagaagcaacaggtgattaacgattatgaggcag gaaaggccataccaaatcaacaggttcttgctaaaatggaaagagttctcgcaatgaaactgcgaggtaaagacaaaggg aaacctctcggaggcccggcgaaaaagtga |
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Protein
| Protein ID | pfu_aug2.0_3819.1_32557.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3819.1_32557.t1 MAEADWSEVTYIGKKPPKGGQLRSQQAINAAKRSGAEIETTKNMSSDRQSDRQTYGQRADTAATKYDAGHNRNKTIDKNT AKLDRETEELHHDTVTLDVSRLIQQGRQAKGLTQKELATKINEKQQVINDYEAGKAIPNQQVLAKMERVLAMKLRGKDKG KPLGGPAKK |
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