Gene
| Gene Model ID | pfu_aug2.0_3819.1_32559 |
|---|---|
| Locus | scaffold3819.1 : 23716 ... 53468 : + |
| To GenomeBrowser | scaffold3819.1:23716..53468 |
| Genes list of scaffold | scaffold3819.1 |
| Synonym | pfu_aug1.0_791.1_43828 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3819.1_32559.t1 | 5 | 1 | DNA_pol_phi | 12 | 139 | 3.2e-24 | 84.7 | 8.1e-06 | 0.06 | 11.1 |
| pfu_aug2.0_3819.1_32559.t1 | 5 | 2 | DNA_pol_phi | 270 | 308 | 3.2e-24 | 84.7 | 0.034 | 250.0 | -0.9 |
| pfu_aug2.0_3819.1_32559.t1 | 5 | 3 | DNA_pol_phi | 446 | 533 | 3.2e-24 | 84.7 | 1.8e-15 | 1.3e-11 | 43.0 |
| pfu_aug2.0_3819.1_32559.t1 | 5 | 4 | DNA_pol_phi | 548 | 665 | 3.2e-24 | 84.7 | 1.6e-18 | 1.2e-14 | 53.1 |
| pfu_aug2.0_3819.1_32559.t1 | 5 | 5 | DNA_pol_phi | 715 | 762 | 3.2e-24 | 84.7 | 0.14 | 1000.0 | -3.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3819.1_32559.t1 | gi|196002421|ref|XP_002111078.1| | hypothetical protein TRIADDRAFT_54659 [Trichoplax adhaerens] | 4.0e-29 |
| pfu_aug2.0_3819.1_32559.t1 | gi|665816215|ref|XP_008556812.1| | PREDICTED: myb-binding protein 1A-like protein isoform X1 [Microplitis demolitor] | 8.0e-28 |
| pfu_aug2.0_3819.1_32559.t1 | gi|383858914|ref|XP_003704944.1| | PREDICTED: myb-binding protein 1A-like protein isoform X2 [Megachile rotundata] | 1.0e-24 |
| pfu_aug2.0_3819.1_32559.t1 | gi|749751982|ref|XP_011138316.1| | PREDICTED: DNA polymerase V-like [Harpegnathos saltator] | 4.0e-22 |
Transcript
| Transcript ID | pfu_aug2.0_3819.1_32559.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3819.1_32559.t1 atggctcaggaacaaggaaatattcttcttgggaagaccttagcatatttagccctgatccagtccggtagactctgcca gaatcaggagtcacagcttcaaaaagtgaccaaacatttgttggaaataaaaaagaagaaatcctatcttcaacagattt gcacaaatgctgttgctatagcgatcagtcaggttgatactgaaacttttaagggttacatatatcccgagatagagggt gatttgatccaaggctgggaagcatgtacaccggactccttcctcctcctgttgtcctgttataaacaccaatcggaaac tgtcaacaagaaattcttgaagcagtattggcagtgctcaaagctgatatctaacgacaattttgaaagactgtggaaaa tcataatgcaaactgcggtccatccagtacgacacattgttgtagaccagattgttgatggaatcctagagatgccctct tctgtatcagatttctggagctgtggacttgatctaacgtttggaaaagctccttcaagtgcagctctcggacttcatgt gttactgaaaattcttccttttgttcaaagtgtggatcaggtgaatagcatactagtgccatccgtttttgacacgttga caaaagctgtggacagcaagaagaaaagtagccatccgttacattctgtggcaaaagaaacgattgaggcacttacactg actatcaagcagtttacagatggagatttacagcttgctgtattgaaatgtttagaatcatcctctctcagaatgggcaa agaaatgaatgtcatcaaagattccgtactcaattctttgaaacctgatgctgtcaagacacactcacaacatctactca aagtattccacaagctcaacaagcaaaatgaggatgaagaaaatgatgccaaaatcttcacggtaatcaccgatatacgc accctcgtcagtttacagtctatgattggagagaatgattggcaggtccatctattaaaattcctggccattcactccta ctggaacgttacacagaaaacccctgatcttgcccattgtgaaaaggaaacaaagactctgagtacggcagtaagaaagt tgttccaggacagcttctttagaactcttgataatctacttcttcacaaaggaggttttaaatcagtgggacatctcttt aagtgtgatatcctccatcaaagaaaagctgaaaccagaagagagttcaggcattcaccagtgtttggcattacttatcc tatatcactgtgttcagttgctggtacaaccaagaaatcacttgtctgttttagagaacctaattggatagaggtgataa tggaagtattattgagtatgatgtcacagggctcgaacctggccagagtgacggctaaagcagcatttggacttacatgt gaacatactacgcctgactcacttacgttcatcacagaggttcttgatgctgaaaagctgggaggtgatgaagagggtcc catagcatttgaagatgatcaagacatggaagatgatgatgatgaggaagattttgaagaagatgtcgaagaagatgaaa atacttgtggaaatgaaaaatgtaaggataaagcatgctgtgaaggagatcaaaatgaagatgtagatgataatgaggat gaaagtgagagcagtagtggagaggaagaagaagaagaagaggaggaggaggaagaggagggagggcaagtagatgacac atttagggatgcagtaagaacagcactgggagatgctgctgtgaagaacgatgatgatgataatgaagatgattcagacg atgaccttagtgacagtgagatgttcaagtttgacgaggccctggcagcagtgtttagagatatgcaaagagggaaaaac aaaactaaagccgaaatgaagagacaacttaatacatttaaaatcagagttttggatttggtagaagttttagtgaaaag tcaaccaaaaggagatctgattatggacttgatcttcccattattacggctgatgatgtcacaggagaaagacaaggatc agagacagataggtcataaagcagaaaatgtcctcaaaatgctgtataaaaaagctgaggtgaggctgctattgaaccta gagatggagagtgcagaaccatcaccagtaaaaacccggtcacagagggttcataccgagaaaatctccacagaggaaca gagtcaaaaagacaaggaaagattacaacaagaaatgttagacattatagggaaaagactaatcgatcttgtgcataaaa acgaaagcaaacttcatcaaggattctttgaaaacatgttcacaaagtaccctgttttgttttggccaatgacagacatt ttactgaaggcaggaatggacaaagatatcaaggtttttggtagaagtcaggctgtgtccctgctgattccgtttgtcaa taaagtatct |
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Protein
| Protein ID | pfu_aug2.0_3819.1_32559.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3819.1_32559.t1 MAQEQGNILLGKTLAYLALIQSGRLCQNQESQLQKVTKHLLEIKKKKSYLQQICTNAVAIAISQVDTETFKGYIYPEIEG DLIQGWEACTPDSFLLLLSCYKHQSETVNKKFLKQYWQCSKLISNDNFERLWKIIMQTAVHPVRHIVVDQIVDGILEMPS SVSDFWSCGLDLTFGKAPSSAALGLHVLLKILPFVQSVDQVNSILVPSVFDTLTKAVDSKKKSSHPLHSVAKETIEALTL TIKQFTDGDLQLAVLKCLESSSLRMGKEMNVIKDSVLNSLKPDAVKTHSQHLLKVFHKLNKQNEDEENDAKIFTVITDIR TLVSLQSMIGENDWQVHLLKFLAIHSYWNVTQKTPDLAHCEKETKTLSTAVRKLFQDSFFRTLDNLLLHKGGFKSVGHLF KCDILHQRKAETRREFRHSPVFGITYPISLCSVAGTTKKSLVCFREPNWIEVIMEVLLSMMSQGSNLARVTAKAAFGLTC EHTTPDSLTFITEVLDAEKLGGDEEGPIAFEDDQDMEDDDDEEDFEEDVEEDENTCGNEKCKDKACCEGDQNEDVDDNED ESESSSGEEEEEEEEEEEEEGGQVDDTFRDAVRTALGDAAVKNDDDDNEDDSDDDLSDSEMFKFDEALAAVFRDMQRGKN KTKAEMKRQLNTFKIRVLDLVEVLVKSQPKGDLIMDLIFPLLRLMMSQEKDKDQRQIGHKAENVLKMLYKKAEVRLLLNL EMESAEPSPVKTRSQRVHTEKISTEEQSQKDKERLQQEMLDIIGKRLIDLVHKNESKLHQGFFENMFTKYPVLFWPMTDI LLKAGMDKDIKVFGRSQAVSLLIPFVNKVS |
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