Gene
| Gene Model ID | pfu_aug2.0_383.1_10699 |
|---|---|
| Locus | scaffold383.1 : 69496 ... 71069 : + |
| To GenomeBrowser | scaffold383.1:69496..71069 |
| Genes list of scaffold | scaffold383.1 |
| Synonym | pfu_aug1.0_1316.1_51274 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| neuronal acetylcholine receptor subunit alpha-3 | GO:0006810 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_383.1_10699.t1 | 1 | 1 | Neur_chan_LBD | 7 | 190 | 1.1e-39 | 135.9 | 2.00386e-43 | 1.5e-39 | 135.3 |
| pfu_aug2.0_383.1_10699.t1 | 2 | 1 | Neur_chan_memb | 209 | 297 | 1.2e-14 | 54.8 | 8.0e-18 | 5.9e-14 | 52.5 |
| pfu_aug2.0_383.1_10699.t1 | 2 | 2 | Neur_chan_memb | 345 | 375 | 1.2e-14 | 54.8 | 0.0062 | 46.0 | 3.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_383.1_10699.t1 | gi|584044858|ref|XP_006767268.1| | PREDICTED: neuronal acetylcholine receptor subunit alpha-3 [Myotis davidii] | 4.06377e-44 |
Transcript
| Transcript ID | pfu_aug2.0_383.1_10699.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_383.1_10699.t1 atgacgacaaaatctgaatacgatctacataccgtccttttttcgaattattcttcggacattcgtccagtgaacgacga gaaagccaaactgaccatcaatgttacggccttccttacctcaatagttggattagacgaaccgtcagggcaacttgtta ccaccatggcatttgtttttacttggattgacataggcttattgtggagccccgacgactatgatggacggacgaatatt tatgtggacttcagaagaatatggaccccacctatatttcttttgaatcccagtcagagtttacagagacttggaaatga aggagggaagaccccggtcagacacgacgggcttgtcacatggagtgttggagggattatgcattctacgtgccatgtag atgttacatactttccttttgatgaacaaaaatgcttgattaaattcaatgcgtttgaatatgaattcctgatagaatat caaattttgcagagttcgatgaatatgttacttttcaccgaaaatggagtgtggcaagtggaaaagactgaagtcacgac atatcagtacacaattatatgcactctgtatttgaaaagaaggtctactttttatcaactcaacattattactcctatca tgatcctggtgtttcttaacagcatggtgttcttgcttccagcagaaagcggtgagcgtgttggatttgcggtcaccatt ttgctctccgtttctgtgtatatgaccataattgctgatagtctaccaagcacatccaagccagtgtctattttgaacta cgtgctgatattctttcttactcaatcagcggttatatgcattaaaacgataattggaattcgtatgtacgcaaaagcag atttgaggaaaacctcaacgttcctgcatggcattgttaaactattcaagagtggatctttagtaagggtatgcgaggat aggaaagttcatattgacaacgatacgaaggatgatagtgaaaagaaagcgatgggaatagattgtaagacgactcaaga tgagaatgatagaaatgccattacatggacgctggtggcagaagccttcgacagactgtcactatgtgtgaatttgatat taaccaatgtggtcgttgtggcttttatcgcagtcattgtaagaggaaccaagcattag |
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Protein
| Protein ID | pfu_aug2.0_383.1_10699.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_383.1_10699.t1 MTTKSEYDLHTVLFSNYSSDIRPVNDEKAKLTINVTAFLTSIVGLDEPSGQLVTTMAFVFTWIDIGLLWSPDDYDGRTNI YVDFRRIWTPPIFLLNPSQSLQRLGNEGGKTPVRHDGLVTWSVGGIMHSTCHVDVTYFPFDEQKCLIKFNAFEYEFLIEY QILQSSMNMLLFTENGVWQVEKTEVTTYQYTIICTLYLKRRSTFYQLNIITPIMILVFLNSMVFLLPAESGERVGFAVTI LLSVSVYMTIIADSLPSTSKPVSILNYVLIFFLTQSAVICIKTIIGIRMYAKADLRKTSTFLHGIVKLFKSGSLVRVCED RKVHIDNDTKDDSEKKAMGIDCKTTQDENDRNAITWTLVAEAFDRLSLCVNLILTNVVVVAFIAVIVRGTKH |
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