Gene
| Gene Model ID | pfu_aug2.0_383.1_10700 |
|---|---|
| Locus | scaffold383.1 : 72446 ... 74458 : + |
| To GenomeBrowser | scaffold383.1:72446..74458 |
| Genes list of scaffold | scaffold383.1 |
| Synonym | pfu_aug1.0_1316.1_51275 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_383.1_10700.t1 | 2 | 1 | DUF1011 | 312 | 409 | 2.3e-29 | 101.2 | 1.5e-33 | 2.3e-29 | 101.2 |
| pfu_aug2.0_383.1_10700.t1 | 2 | 2 | DUF1011 | 413 | 429 | 2.3e-29 | 101.2 | 0.15 | 2300.0 | -1.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_383.1_10700.t1 | gi|348502810|ref|XP_003438960.1| | PREDICTED: solute carrier family 52, riboflavin transporter, member 3-A-like [Oreochromis niloticus] | 0.0 |
| pfu_aug2.0_383.1_10700.t1 | gi|198419093|ref|XP_002122371.1| | PREDICTED: solute carrier family 52, riboflavin transporter, member 3-B [Ciona intestinalis] | 0.0 |
| pfu_aug2.0_383.1_10700.t1 | gi|548364606|ref|XP_005731638.1| | PREDICTED: solute carrier family 52, riboflavin transporter, member 3-A-like [Pundamilia nyererei] | 0.0 |
| pfu_aug2.0_383.1_10700.t1 | gi|734606427|ref|XP_010730356.1| | PREDICTED: solute carrier family 52, riboflavin transporter, member 3 [Larimichthys crocea] | 0.0 |
| pfu_aug2.0_383.1_10700.t1 | gi|583998139|ref|XP_006794156.1| | PREDICTED: LOW QUALITY PROTEIN: solute carrier family 52, riboflavin transporter, member 3-A-like [Neolamprologus brichardi] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_383.1_10700.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_383.1_10700.t1 atggcggagatacattgctgctggaaggatgtagacagactggtatttttcttcacgttatgttttggaataggctcctg gattaccattaacggtctctgggtggaactaccttccattgtgccacatgttcctgagggatggactctaccctcatacc tgtccgttattggtcaaattgcaaatattggaccgatcaccgtgacgttgattcacttctttgcgcctggaaaactgaaa gacaccgttgctgcatatggcatcattggtatcggtgccatatcttgtatactgttatcgtttacttgggacactacggg atacattggtgggtcggagcatagcgtggctttattggtgctggtgttctttacgtccttggcagattgcacgtcttctg ttgtattcataccatatatgtcagtttacaaaccagtgtatatgacggctctgtatataggagagggaatgagcggtctg tttcctgggtttgtcgccctcggtcaaggcgtagggcagtcaagctgtcagaacgtaaccaaattcaatcaaacaatcaa catgacttactacgaaatggaaatggtctatgagggactgaactttccagtgcgggatttctttttctttctctttggga tgatggtgataagcggcataggattcacaatgctgaatttcttaccacactgtaaaaaggagcaaattcaaccaaaacca aagtccccgtcggttgtttctatgccttatgtcgatagtacgtttccaactccagcacatgcgctccgaaacactacaaa ttcaactgacatcagtacgtatagtgttttatatgaagatgcccatttagacggatctctttcacaatcagcacaatcag acactactgataaacaagaggtacaagaagagaattttgcaaaactgagcatagagacaagagcatacctacttttgata atcggtgtattaagttttgcaggtaatggcctgctgtcatctactagcacttactccagccttccgtatggtgaaaaagc atatcatctctccgtcacgctcagtaacatcgcaaatccagtggcgtgcatgatagcttttctagtgagtgttcgaaatg tacccgtcattacctgtatgtggactgtgtggataggactcagtgcgtatagcctgtacttagccgcgactagcccttat cctgtcctcgtgggaacattgacggggtcatcactcatgataacaacatccgtggttgcaacattcatcatgtcttacat caaagtttgtatcgccattttgttcagggagcaagggaaatctgcgcttgtgtggcttggagggataactcaacttggtg ctttcttgggatcggtgttgggatacatccttgtgaatgtaggaaacgtatttgaggctgggcaagagacttgttaa |
|
Protein
| Protein ID | pfu_aug2.0_383.1_10700.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_383.1_10700.t1 MAEIHCCWKDVDRLVFFFTLCFGIGSWITINGLWVELPSIVPHVPEGWTLPSYLSVIGQIANIGPITVTLIHFFAPGKLK DTVAAYGIIGIGAISCILLSFTWDTTGYIGGSEHSVALLVLVFFTSLADCTSSVVFIPYMSVYKPVYMTALYIGEGMSGL FPGFVALGQGVGQSSCQNVTKFNQTINMTYYEMEMVYEGLNFPVRDFFFFLFGMMVISGIGFTMLNFLPHCKKEQIQPKP KSPSVVSMPYVDSTFPTPAHALRNTTNSTDISTYSVLYEDAHLDGSLSQSAQSDTTDKQEVQEENFAKLSIETRAYLLLI IGVLSFAGNGLLSSTSTYSSLPYGEKAYHLSVTLSNIANPVACMIAFLVSVRNVPVITCMWTVWIGLSAYSLYLAATSPY PVLVGTLTGSSLMITTSVVATFIMSYIKVCIAILFREQGKSALVWLGGITQLGAFLGSVLGYILVNVGNVFEAGQETC |
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