Gene
| Gene Model ID | pfu_aug2.0_383.1_10704 |
|---|---|
| Locus | scaffold383.1 : 154720 ... 156205 : - |
| To GenomeBrowser | scaffold383.1:154720..156205 |
| Genes list of scaffold | scaffold383.1 |
| Synonym | pfu_aug1.0_888.1_07728 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| neuronal acetylcholine receptor subunit alpha-6-like | GO:0004888 GO:0006812 GO:0007165 GO:0016021 GO:0044456 GO:0044464 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_383.1_10704.t1 | 1 | 1 | Neur_chan_LBD | 29 | 177 | 8.2e-31 | 106.8 | 5.6e-34 | 2.8e-30 | 105.1 |
| pfu_aug2.0_383.1_10704.t1 | 1 | 1 | Neur_chan_memb | 235 | 364 | 1.6e-10 | 41.3 | 7.2e-14 | 3.6e-10 | 40.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_383.1_10704.t1 | gi|390353852|ref|XP_001196576.2| | PREDICTED: neuronal acetylcholine receptor subunit alpha-10 [Strongylocentrotus purpuratus] | 2.0e-32 |
Transcript
| Transcript ID | pfu_aug2.0_383.1_10704.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_383.1_10704.t1 atgaagattattgtcatcttgcttattccacttgtttttgttgttgcaacttctatgggcggtacacatatacaatctgc ttttgatctttatgacaagttgatgagaaactactctaaggatatcagacctgtgcacaatgagaacaaaaagctcattg tcagtctaactgcaatcctgtactctgtagacagcctggatgaagtttctgggaaatgtgttgttaaccttggattttac atgaaatggtatgatgtaagtttgacgtggaatttacacgaatatgagaatatatcaagaatggaaatagacgttacacg tatctggagaccagcgctgcagctctacgtaccgattcaaatgtcgacaagacttgggaaggaagaagataaagctgtag tcaacaatcagggtttgatatcattgtttataaatgacattttccaaactatatgctttgtttatatatatcattttcca ttcgattcacaaatatgtgacatatggtttggaatgaaggaatatccaaatcttctaggcattgtacctacgtcaacagt gatggacacatcagtgctatttgagaactccaattggatcgtagaaggcaccggtttggttagccttcaattcgaatctc atgataatcttatatgtagaatttttgtgaagagacgaccatcattttacgtcctaacaatgttagctccgacactgacg cttatattactaaacagtgtagtgttccttttaccagcagagtgtggagaacgtgtgggtttctcagagaccttgctgtt atcgactgctgtgtatatgaccatcatatctgacaaactccaaagctcccccaagccttgtccagtgctagcatacgccc tgttggcttacatagctcagtcctcactcatctgtattgaaacaatgatcggtttgaggatatacttcagcgatgacgac aaaccaattccaccggtattatcttttgctgtacattccctaaaatgtaattttagaaggaaagaaaacagaatagcgga gagggatgataccctgaatatgaatgatcaaaacgagaagaatttcaggaaaagtgatgcagcagatgaggtcacatgga aatcaattgcaaggatatacgacaaaaatgtatttttcatgaatatattactgacgtttattatagcaattgtgtactta agtattgttgtgtaa |
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Protein
| Protein ID | pfu_aug2.0_383.1_10704.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_383.1_10704.t1 MKIIVILLIPLVFVVATSMGGTHIQSAFDLYDKLMRNYSKDIRPVHNENKKLIVSLTAILYSVDSLDEVSGKCVVNLGFY MKWYDVSLTWNLHEYENISRMEIDVTRIWRPALQLYVPIQMSTRLGKEEDKAVVNNQGLISLFINDIFQTICFVYIYHFP FDSQICDIWFGMKEYPNLLGIVPTSTVMDTSVLFENSNWIVEGTGLVSLQFESHDNLICRIFVKRRPSFYVLTMLAPTLT LILLNSVVFLLPAECGERVGFSETLLLSTAVYMTIISDKLQSSPKPCPVLAYALLAYIAQSSLICIETMIGLRIYFSDDD KPIPPVLSFAVHSLKCNFRRKENRIAERDDTLNMNDQNEKNFRKSDAADEVTWKSIARIYDKNVFFMNILLTFIIAIVYL SIVV |
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