Gene
| Gene Model ID | pfu_aug2.0_383.1_10705 |
|---|---|
| Locus | scaffold383.1 : 171379 ... 180119 : - |
| To GenomeBrowser | scaffold383.1:171379..180119 |
| Genes list of scaffold | scaffold383.1 |
| Synonym | pfu_aug1.0_888.1_07729 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| neuronal acetylcholine receptor subunit alpha-3 | GO:0006810 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_383.1_10705.t1 | 2 | 1 | Neur_chan_LBD | 31 | 140 | 0.0 | 191.0 | 1.6e-24 | 1.2e-20 | 73.6 |
| pfu_aug2.0_383.1_10705.t1 | 2 | 2 | Neur_chan_LBD | 149 | 352 | 0.0 | 191.0 | 2.0e-38 | 1.5e-34 | 119.0 |
| pfu_aug2.0_383.1_10705.t1 | 1 | 1 | Neur_chan_memb | 363 | 490 | 4.7e-18 | 65.9 | 9.2e-22 | 6.8e-18 | 65.4 |
Transcript
| Transcript ID | pfu_aug2.0_383.1_10705.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_383.1_10705.t1 atgatgaatggaaatattctgctcttttttggtcttctgtgtgcattatgtttcaatctatcaaaaggaaagaccattca atcaacatacaatttgtacaatgatttacttgccaattatacatcagacatcagacctgttgacgatgacaccgacatac ttaacgtgactacaacgctgtacctcaccggcatcttagaactggacgaaccaagaggacaacttacttcggctttatct atgaccttaatgtggaaggacatactgctgacctggaatccagcagattacgaattgagaaacaaaattgagatttctaa gaaacatatttggactcctgaattgatgcttatatcaccaagtcaatctgccgaaaagctcggcaaagacagcgataaag tcctgatttacagctacggcgcaggaaagaccattcaatcaacatacaaattgtacaatgatttacttgccaattataca tcagacatcagacctgttgacgatgacaacgacatacctaacgtgactacaacgctgtacctctccggcatcttagaact ggacgaaccaagaggacaacttacttcggctttatctatgaccttaatgtggaaggacatactgctgacctggaatccag cagattacgaattgagataccaaattgagatttctaagaaacatatttggactcctgaattgatgcttatatcaccaagt caatctgctgaaaaactcggcaaagacagcaataaagttctgattcacagttacggtgcaggtactggattcctatcgtt aacaatcattgatatattttacacaatatgcgatactgaagtcacgtattttccgtttgatacccaaatttgtgaaataa gattttctcagtatgattatgcagccaagattcgatatgtgatcttagaaaacgcgatgaatacagatttctttctagag aacggtgtttggaatgttgagaaaactgagttatttacagagaatagaaacaactttaactacgacgttgtaggtaggat acacatgaaaagaagatccacatattactctttaaatctgctaggaccgatacttatcttgatgcttctgaactgcatgg tatttttgctacccgccgagagtggagaacgtgtaggttttgcagtcacaattcttctagccatagctgtatatatgaca atcatagcagataaattaccaaatacatccaaaccagtatcagttcttacgttcattcttgtcatatacatggcgcagtc gtcgatgatatgtgtctgtacaatatttagcctacggatagttttccgagacgagaagacaccagtttcaaagacatgga atatattcgttcgaattatgaaatgttgtagaagtcgtgtcgcacatgaacacaacgatcaccttgcatcatctgaagaa accaagtctgaaaccaaagaaaagtcagaacatgaccagggaatcacatag |
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Protein
| Protein ID | pfu_aug2.0_383.1_10705.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_383.1_10705.t1 MMNGNILLFFGLLCALCFNLSKGKTIQSTYNLYNDLLANYTSDIRPVDDDTDILNVTTTLYLTGILELDEPRGQLTSALS MTLMWKDILLTWNPADYELRNKIEISKKHIWTPELMLISPSQSAEKLGKDSDKVLIYSYGAGKTIQSTYKLYNDLLANYT SDIRPVDDDNDIPNVTTTLYLSGILELDEPRGQLTSALSMTLMWKDILLTWNPADYELRYQIEISKKHIWTPELMLISPS QSAEKLGKDSNKVLIHSYGAGTGFLSLTIIDIFYTICDTEVTYFPFDTQICEIRFSQYDYAAKIRYVILENAMNTDFFLE NGVWNVEKTELFTENRNNFNYDVVGRIHMKRRSTYYSLNLLGPILILMLLNCMVFLLPAESGERVGFAVTILLAIAVYMT IIADKLPNTSKPVSVLTFILVIYMAQSSMICVCTIFSLRIVFRDEKTPVSKTWNIFVRIMKCCRSRVAHEHNDHLASSEE TKSETKEKSEHDQGIT |
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