Gene
| Gene Model ID | pfu_aug2.0_383.1_10707 |
|---|---|
| Locus | scaffold383.1 : 193949 ... 226389 : - |
| To GenomeBrowser | scaffold383.1:193949..226389 |
| Genes list of scaffold | scaffold383.1 |
| Synonym | pfu_aug1.0_888.1_07731 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_383.1_10707.t1 | 1 | 1 | RUN | 429 | 579 | 7.1e-23 | 80.8 | 6.9e-26 | 2.5e-22 | 79.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_383.1_10707.t1 | gi|524916104|ref|XP_005112834.1| | PREDICTED: RUN domain-containing protein 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_383.1_10707.t1 | gi|676447831|ref|XP_009051537.1| | hypothetical protein LOTGIDRAFT_104100, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_383.1_10707.t1 | gi|585651317|ref|XP_006814724.1| | PREDICTED: RUN domain-containing protein 1-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_383.1_10707.t1 | gi|66519549|ref|XP_393737.2| | PREDICTED: RUN domain-containing protein 1-like [Apis mellifera] | 0.0 |
| pfu_aug2.0_383.1_10707.t1 | gi|572305140|ref|XP_006618509.1| | PREDICTED: RUN domain-containing protein 1-like [Apis dorsata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_383.1_10707.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_383.1_10707.t1 atggagattgccaaacaaaatctggctcataagacttataacattgggacgtctgttcgtcagtctttccgtctgcgtca acacgatttacctgttgcgttcaatttagttgtgaaagaactacaaggaatgatggaggagaccacagtacatacagatg agagctatgattatgacagctttgatgaacagaactatgacagacccacagaacgatgggctccacttggtgcctccacc agccctgccccagaaactagccatgacactcagatgactcagctgagggagttagaagaggagcaagaacagttaaactc atccttactcgcactcactactcactttgcccaagttcagttcagactcaaacagattgtcaatgctccaccagatgata aggaggatttgttaaaggagcttgaagagtttgcctttaagggtatacctgatgtcagagggacaaaaatacaagatgct cagattttacaggagatgagtgatatggaacatgagatgaaaatctcagagcaaagagaaaaacaaagggaattaatcca tcagctaaagtctcaacttgaagatcttgaaaattatgcatatgagacaggggatcatgatgagctgccaacaaataaga tgatggagaaacagaaagtagttattgatgaattacggcacaaacttgacctggatctggagaacttcaacaagctgagt cctgatgaactgaggcgtgtcgtagatcatgctataggacagattgtaaacccggcaaaagtgaaagaaaaattggtgga ccagcttaaaacacagataacagacttggagagattcatatcttttctacaaggtgaagctagtagtccagggccccttg ggaaggaaagatgtacctgtcctgttcatcagattcctgatgtctccaaggactctcacaagtcacacgtacataaaaaa gagaacaagaccaagaatgtccgtgaccatgaagcctttgtcaagaaaaccatggccattcttcatatgtttatcattag tcagtttgggtgtggcacaaaagagttcaagaggaatacattaaagaaaacaacaaaaggaaatcactggggtgatttac gggccaaatttgaagtagcagtacagaaagtgtgggatcttgctcaggaagaagaagaagaggaagttagagtaagacga gaaagtcagagtgaatatgctagcgattcagaggaggctcaagagcagaacagtccagctttggtacaggctgtcaggaa agatttggctatggctgtaagagacttaatggagcatggactcatggagattggtcagagtaccagtatggtgccgtttg gatgtttcccctcaaggtcagctgctgtgacacaaacaatgcatgcatgggacttactacttaaattctatgaaatgaag catggtaaggagtataacgagtctccagccaggaagctgtcccagtccttccaccttgagatggtggggggtaaggccat taccacgaaacagacattcctcggggctatagacactgtcatctcctcacatacaccgctaaaacgtagtgaagatgctc acttcaaagcttttatttcactcggtctcaatgagaagaagttgacgacatggtttaagttgttgttccgtacgcaaacg ttgatcgataattattatcaggactggagctacgtggccagaacaggcaacaaatctgctttatgggtattcaagtaa |
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Protein
| Protein ID | pfu_aug2.0_383.1_10707.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_383.1_10707.t1 MEIAKQNLAHKTYNIGTSVRQSFRLRQHDLPVAFNLVVKELQGMMEETTVHTDESYDYDSFDEQNYDRPTERWAPLGAST SPAPETSHDTQMTQLRELEEEQEQLNSSLLALTTHFAQVQFRLKQIVNAPPDDKEDLLKELEEFAFKGIPDVRGTKIQDA QILQEMSDMEHEMKISEQREKQRELIHQLKSQLEDLENYAYETGDHDELPTNKMMEKQKVVIDELRHKLDLDLENFNKLS PDELRRVVDHAIGQIVNPAKVKEKLVDQLKTQITDLERFISFLQGEASSPGPLGKERCTCPVHQIPDVSKDSHKSHVHKK ENKTKNVRDHEAFVKKTMAILHMFIISQFGCGTKEFKRNTLKKTTKGNHWGDLRAKFEVAVQKVWDLAQEEEEEEVRVRR ESQSEYASDSEEAQEQNSPALVQAVRKDLAMAVRDLMEHGLMEIGQSTSMVPFGCFPSRSAAVTQTMHAWDLLLKFYEMK HGKEYNESPARKLSQSFHLEMVGGKAITTKQTFLGAIDTVISSHTPLKRSEDAHFKAFISLGLNEKKLTTWFKLLFRTQT LIDNYYQDWSYVARTGNKSALWVFK |
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