Gene
| Gene Model ID | pfu_aug2.0_383.1_10711 |
|---|---|
| Locus | scaffold383.1 : 252700 ... 264533 : + |
| To GenomeBrowser | scaffold383.1:252700..264533 |
| Genes list of scaffold | scaffold383.1 |
| Synonym | pfu_aug1.0_1285.1_07877 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 3-ketoacyl- mitochondrial | GO:0005743 GO:0008152 GO:0016747 GO:0044822 GO:0070062 GO:0071456 GO:1901029 GO:1902109 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_383.1_10711.t1 | 1 | 1 | Thiolase_N | 24 | 283 | 0.0 | 301.5 | 0.0 | 0.0 | 301.0 |
| pfu_aug2.0_383.1_10711.t1 | 1 | 1 | Thiolase_C | 291 | 413 | 2.8026e-45 | 152.4 | 0.0 | 8.40779e-45 | 151.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_383.1_10711.t1 | gi|676477247|ref|XP_009061051.1| | hypothetical protein LOTGIDRAFT_219437 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_383.1_10711.t1 | gi|591360591|ref|XP_007055214.1| | PREDICTED: 3-ketoacyl-CoA thiolase, mitochondrial [Chelonia mydas] | 0.0 |
| pfu_aug2.0_383.1_10711.t1 | gi|530610638|ref|XP_005296939.1| | PREDICTED: 3-ketoacyl-CoA thiolase, mitochondrial [Chrysemys picta bellii] | 0.0 |
| pfu_aug2.0_383.1_10711.t1 | gi|701364573|ref|XP_010006804.1| | PREDICTED: 3-ketoacyl-CoA thiolase, mitochondrial [Chaetura pelagica] | 0.0 |
| pfu_aug2.0_383.1_10711.t1 | gi|57529492|ref|NP_001006571.1| | 3-ketoacyl-CoA thiolase, mitochondrial [Gallus gallus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_383.1_10711.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_383.1_10711.t1 atgttcgcccgcaccaataaatttctggctcaagaattttttagggtcggttctgatttctctgtttcgggcgtgtttat tgtggctgcaaagcggacagcatttgggacatatggtggaaagcttgtaggaaaatctgccacagatctgatggaggtag cctccaaagcagcactccaggcaggaaaagtcaaccctgaaatcatcaactctgtcattgttggaaatgttttgacatca tcaactgatggtatttatattgctcgtcatgtgggtctgaagtgtggtgtaccaatagacgtgcctgcccttactgtcaa cagactctgtggatcagggttccaggcaatcatcaatggagctcaggaaatcatgcttggagagagccaggtggcattag taggaggcagtgataacatgagtcaagctccatatgcagtccgcaatgttagatttggtactaagttaggcatgcaacta aagttagaggacaccatgtgggaagccctgacagattcctatacaggcttacctatggccatcacagcagagaatctagc ggagcagtatggtctctccaggcaagactgtgacaattatgccttacagactcaacaaagatgggcagcagcacaagaag ctggtgttttcaaatcagaaattacaccaatatctttgaaaggaaagaaaggaccagaaacatttgaagttgatgaacat ccaaaaccaaagtcaacacctgaaaacttggctaaactccctccagtttttaaaaaggatggtacagttactgctggcaa tgcctctggtgtatgtgacggggcagcagctttagttatagccagtgaagcagcagtcaaacaacataaccttacacctt tagctaggcttgtctcttatggaatttcaggttgtgaccctaagataatgggtataggtccagccccctcatctagggca gcattgaaggcagctggtaaagatgtcaaagacatgcaaattgtggaggtgaatgaggcttttgcaccccagtatttggc tgtggagaaggagctgggtctgaatagagagataaccaacatgaacggaggagccattgccctaggacatccattagcag cttcaggagccagaataacgggtcatcttacacatgaactacagaggcagaacaaacagtttgctttaggaacagcctgt ataggtggaggacagggcattgcagtgattttggaaaaatgctga |
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Protein
| Protein ID | pfu_aug2.0_383.1_10711.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_383.1_10711.t1 MFARTNKFLAQEFFRVGSDFSVSGVFIVAAKRTAFGTYGGKLVGKSATDLMEVASKAALQAGKVNPEIINSVIVGNVLTS STDGIYIARHVGLKCGVPIDVPALTVNRLCGSGFQAIINGAQEIMLGESQVALVGGSDNMSQAPYAVRNVRFGTKLGMQL KLEDTMWEALTDSYTGLPMAITAENLAEQYGLSRQDCDNYALQTQQRWAAAQEAGVFKSEITPISLKGKKGPETFEVDEH PKPKSTPENLAKLPPVFKKDGTVTAGNASGVCDGAAALVIASEAAVKQHNLTPLARLVSYGISGCDPKIMGIGPAPSSRA ALKAAGKDVKDMQIVEVNEAFAPQYLAVEKELGLNREITNMNGGAIALGHPLAASGARITGHLTHELQRQNKQFALGTAC IGGGQGIAVILEKC |
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