Gene
| Gene Model ID | pfu_aug2.0_383.1_10716 |
|---|---|
| Locus | scaffold383.1 : 389721 ... 421452 : - |
| To GenomeBrowser | scaffold383.1:389721..421452 |
| Genes list of scaffold | scaffold383.1 |
| Synonym | pfu_aug1.0_8260.1_17269 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| vesicular glutamate transporter 2 isoform x2 | GO:0001504 GO:0005313 GO:0005769 GO:0008021 GO:0016020 GO:0089711 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_383.1_10716.t1 | 2 | 1 | MFS_1 | 41 | 383 | 0.0 | 178.5 | 0.0 | 0.0 | 167.1 |
| pfu_aug2.0_383.1_10716.t1 | 2 | 2 | MFS_1 | 377 | 449 | 0.0 | 178.5 | 1.3e-06 | 0.0098 | 14.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_383.1_10716.t1 | gi|241993484|ref|XP_002399450.1| | sodium/phosphate cotransporter, putative [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_383.1_10716.t1 | gi|564328538|ref|XP_006229327.1| | PREDICTED: vesicular glutamate transporter 2 isoform X1 [Rattus norvegicus] | 0.0 |
| pfu_aug2.0_383.1_10716.t1 | gi|554549884|ref|XP_005869470.1| | PREDICTED: vesicular glutamate transporter 2 isoform X2 [Myotis brandtii] | 0.0 |
| pfu_aug2.0_383.1_10716.t1 | gi|568947279|ref|XP_006540665.1| | PREDICTED: vesicular glutamate transporter 2 isoform X2 [Mus musculus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_383.1_10716.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_383.1_10716.t1 atgaacaaacttggaggtattattgaagtgctgaggctacgtgatatacaacatatatcctcagggctaagtttcaaact taaagaactccataaaggaaagtcacctttgcacctacctgaatttaattggacaccagagacgataggcgttgtggaca gttccttcttctgggggtacatagtcacacagatacctgggggatacttggcttcaaggcttcccgcaagcaggatattt ggccttgccattgggatatcttcctttctgaacattctgcttccgggagcggctagtgtccactacgggctggtaatggc tgtaaggattcttcaggggctagttgagggtgtgacgtatccagcatgtcatggtatatggagatactgggcaccgcccc tggagaggtcaaaactagccaccatatccttctgtggatcgtatgccggtgcagtgttgggaatgccgctgtctggaatt cttaccaagaattttggttggcagtctggattctacgttttcggtgtgatgggaatggtatggtgtgtcatttggatgtt tatgtcgtttgagaagccctctacccacccatacatcacacaggaggagaaaatctacatagaaacaagcattggggaga ctggaatgtccagtactaagactagcagcacaccatggctgagcttcttcacctccatgccagtctatgccatcatagtg gctaacttctgtcgtagctggactttctatttgctcatcatttcacaacctatgtacttcacagaggttttcaaattcaa tgtttccaagagtggaatactatcggcactcccccatctagtgatggctataattgtacccattggtggtgctatagccg actctttgcgcaagcgcactcttacaactaccgtagtcaggaagattttcaattgtggaggatttgggttagaggcgtgt tttcttttgggcgtcgctctaacgagaaataccaccacagctatagtatgtctgacgatggccgttggcttcagtggatt tgctatctcagggtttaacgtaaatcatttggacatcgcccctcggtacgccagcatcctgatgggtctgtctaacggtg tgggtacgctgtccggtatgctgtgtccggtcgtcactgaggtccttacaaagaaggggtcagccgatgagtggcaaact gttttcatcattgccagttgtgtgcattttgctggaataatattctatggattattcgcttccggcgaaaaacaagtatg ggcagacccaccggaagaggaaacatggcgaccggaagatactctcaaagaggagaaatcgggaaagctgttctcatatg gcgcttttaccggttctatggactttactaaagacaaaaatcttagtcaaaatggatctataaataaagaacaagtagct aacggtagcatcggaaatggacagattccgtacgggggttttgatagaagtgaacagtatgggggttacgatgcaccagt tcccaaacaattttcaattgatgctcctttatatcaaacaaaagaagaattagtccaagtagaatctaaggacaaatatt tgcatgatgacagagatttatga |
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Protein
| Protein ID | pfu_aug2.0_383.1_10716.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_383.1_10716.t1 MNKLGGIIEVLRLRDIQHISSGLSFKLKELHKGKSPLHLPEFNWTPETIGVVDSSFFWGYIVTQIPGGYLASRLPASRIF GLAIGISSFLNILLPGAASVHYGLVMAVRILQGLVEGVTYPACHGIWRYWAPPLERSKLATISFCGSYAGAVLGMPLSGI LTKNFGWQSGFYVFGVMGMVWCVIWMFMSFEKPSTHPYITQEEKIYIETSIGETGMSSTKTSSTPWLSFFTSMPVYAIIV ANFCRSWTFYLLIISQPMYFTEVFKFNVSKSGILSALPHLVMAIIVPIGGAIADSLRKRTLTTTVVRKIFNCGGFGLEAC FLLGVALTRNTTTAIVCLTMAVGFSGFAISGFNVNHLDIAPRYASILMGLSNGVGTLSGMLCPVVTEVLTKKGSADEWQT VFIIASCVHFAGIIFYGLFASGEKQVWADPPEEETWRPEDTLKEEKSGKLFSYGAFTGSMDFTKDKNLSQNGSINKEQVA NGSIGNGQIPYGGFDRSEQYGGYDAPVPKQFSIDAPLYQTKEELVQVESKDKYLHDDRDL |
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