Gene
| Gene Model ID | pfu_aug2.0_3831.1_05905 |
|---|---|
| Locus | scaffold3831.1 : 35282 ... 41855 : - |
| To GenomeBrowser | scaffold3831.1:35282..41855 |
| Genes list of scaffold | scaffold3831.1 |
| Synonym | pfu_aug1.0_8792.1_09834 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| neuronal acetylcholine receptor subunit alpha-3-like | GO:0005230 GO:0006812 GO:0007275 GO:0016021 GO:0034220 GO:0043050 GO:0044459 GO:0045202 GO:0050789 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3831.1_05905.t1 | 1 | 1 | Neur_chan_LBD | 27 | 218 | 3.1e-38 | 131.0 | 5.5001e-42 | 4.1e-38 | 130.6 |
| pfu_aug2.0_3831.1_05905.t1 | 1 | 1 | Neur_chan_memb | 239 | 333 | 4.3e-14 | 52.9 | 1.1e-17 | 7.8e-14 | 52.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3831.1_05905.t1 | gi|524896646|ref|XP_005104795.1| | PREDICTED: neuronal acetylcholine receptor subunit alpha-3-like [Aplysia californica] | 7.00005e-41 |
| pfu_aug2.0_3831.1_05905.t1 | gi|676455842|ref|XP_009054137.1| | hypothetical protein LOTGIDRAFT_54302, partial [Lottia gigantea] | 3.0e-38 |
Transcript
| Transcript ID | pfu_aug2.0_3831.1_05905.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3831.1_05905.t1 atgaggtgcaatcgctacaggttgtttgtatatgtgcagatctttgtttgcgcatcgtgtactacagtggacgaaataga cagactgtccgggactttactgaccggctacaacaagtatactagaccgccatacgacaacaaggaaacgctatatgtct atgtaacattcggactcatatctataaattactatgatgacgtcactggcaccttatccattgttgggggaccctctttt acctggaacgactaccgactcggatggaatcctgcggattactctaatattacaactttgattctacctagaactgttat ctggtaccccgaaatctacgtcattaatccagctggaaaaatggatgcttttgctaaaggacagcctctggtcgctcgta tttacccaaatggtgatgtgatcctcacctctggcgatcagataaatgtgatttgccccagcgatatggaatactttcca tttgaccgacaaacgtgcagaatacgtcttgcaatatggaattacgaagcaaatgaagtttttcttaaaagtttacacca cgaagcagacatagaatactacagcaagaacaatctttgggatttggaatccactagttgcaaagacttatctatgggga atttcgatggtttgtttgtagccgaaatgacgatgaagcgcaagtctttgttcctctgcataagcatgttcgccccattt atggtcttagcactcctaaaccctttggtgtttattttaccacaggagagcggagaaagaatttcattttcagtaacgat tctactgtcttttatggtatttatgactttgttgacagaagctcttccgagatcatccacaccggtggccagcgtgtctt actaccttctcaccttcattctctacagctcctgtataattactaccgtgatattttcctccaaagtctactggctgggt aatacaggtgaccaaataaggaaatatgaacgcattgcaaatattttgagtctgtctattctccgcagccgttcacaatg caagaagaaaggatgtgtggctgaatctgctgtgcacgagtcttctatgaatgagaaaagtatcatttatagacgaaatc cacatgatctagctcatcgacttgacaacatagcgttcacatactcaatgttattccttctgattgtgttcatagcattt ttaattcagatgaatacctaa |
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Protein
| Protein ID | pfu_aug2.0_3831.1_05905.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3831.1_05905.t1 MRCNRYRLFVYVQIFVCASCTTVDEIDRLSGTLLTGYNKYTRPPYDNKETLYVYVTFGLISINYYDDVTGTLSIVGGPSF TWNDYRLGWNPADYSNITTLILPRTVIWYPEIYVINPAGKMDAFAKGQPLVARIYPNGDVILTSGDQINVICPSDMEYFP FDRQTCRIRLAIWNYEANEVFLKSLHHEADIEYYSKNNLWDLESTSCKDLSMGNFDGLFVAEMTMKRKSLFLCISMFAPF MVLALLNPLVFILPQESGERISFSVTILLSFMVFMTLLTEALPRSSTPVASVSYYLLTFILYSSCIITTVIFSSKVYWLG NTGDQIRKYERIANILSLSILRSRSQCKKKGCVAESAVHESSMNEKSIIYRRNPHDLAHRLDNIAFTYSMLFLLIVFIAF LIQMNT |
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