Gene
| Gene Model ID | pfu_aug2.0_3841.1_05907 |
|---|---|
| Locus | scaffold3841.1 : 1 ... 1925 : - |
| To GenomeBrowser | scaffold3841.1:1..1925 |
| Genes list of scaffold | scaffold3841.1 |
| Synonym | pfu_aug1.0_5630.1_09180 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3841.1_05907.t1 | 2 | 1 | zf-B_box | 16 | 57 | 2.2e-15 | 56.2 | 1.5e-08 | 2.8e-05 | 23.9 |
| pfu_aug2.0_3841.1_05907.t1 | 2 | 2 | zf-B_box | 74 | 112 | 2.2e-15 | 56.2 | 5.3e-13 | 9.8e-10 | 38.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3841.1_05907.t1 | gi|676455333|ref|XP_009053971.1| | hypothetical protein LOTGIDRAFT_117045, partial [Lottia gigantea] | 4.0e-13 |
| pfu_aug2.0_3841.1_05907.t1 | gi|751798495|ref|XP_011209165.1| | PREDICTED: E3 ubiquitin-protein ligase TRIM33 isoform X3 [Bactrocera dorsalis] | 5.0e-11 |
| pfu_aug2.0_3841.1_05907.t1 | gi|751798497|ref|XP_011209166.1| | PREDICTED: E3 ubiquitin-protein ligase TRIM33 isoform X4 [Bactrocera dorsalis] | 5.0e-11 |
| pfu_aug2.0_3841.1_05907.t1 | gi|751798491|ref|XP_011209162.1| | PREDICTED: E3 ubiquitin-protein ligase TRIM33 isoform X1 [Bactrocera dorsalis] | 5.0e-11 |
| pfu_aug2.0_3841.1_05907.t1 | gi|751798493|ref|XP_011209163.1| | PREDICTED: E3 ubiquitin-protein ligase TRIM33 isoform X2 [Bactrocera dorsalis] | 5.0e-11 |
Transcript
| Transcript ID | pfu_aug2.0_3841.1_05907.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3841.1_05907.t1 atgagtgacaacggagcctcagcgattcctccccagacatttgtggagtgtggccaatgtaaagggaacgtcaacatatc atggttttgtaaaaactgtccttgctcactttgtgacacatgtgctaccgcccacaagacatctcatcaatacaaatccc atacagtcgtgtcacggacatacaccgtccttcgattatacggaccggcaaaactagcagaacaatgccacatccatcca gaaaaagaaatatcgtcctactgcaatgattgcggcattccatgttgtgtgacatgtatggtgaaggatcacaaacgtca tgatttctccacaatagaagacaagttcctggatgctgaaaaaggcctgaatgagtactacagactgctggatactgacg tcagaccaacgcttgaaaagattgaggaacaagccagcgcctatgtcaaggaagatgacagccatgttgagaaagtcata aatgacataaacgatttccgaaaaaatgtcgttcaaaatttcaatagagcatgtgatgatctcattgttcaggttcaatc gttttcatataaaacaaatgaagggttgaaagaaattgaaatctcactgaaaaatcttgaactcattaagaaggatattg aagaaaaaatagcaaggggaaatttagacctaataaaata |
|
Protein
| Protein ID | pfu_aug2.0_3841.1_05907.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3841.1_05907.t1 MSDNGASAIPPQTFVECGQCKGNVNISWFCKNCPCSLCDTCATAHKTSHQYKSHTVVSRTYTVLRLYGPAKLAEQCHIHP EKEISSYCNDCGIPCCVTCMVKDHKRHDFSTIEDKFLDAEKGLNEYYRLLDTDVRPTLEKIEEQASAYVKEDDSHVEKVI NDINDFRKNVVQNFNRACDDLIVQVQSFSYKTNEGLKEIEISLKNLELIKKDIEEKIARGNLDLIK |
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