Gene
| Gene Model ID | pfu_aug2.0_3841.1_05908 |
|---|---|
| Locus | scaffold3841.1 : 6056 ... 8341 : + |
| To GenomeBrowser | scaffold3841.1:6056..8341 |
| Genes list of scaffold | scaffold3841.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3841.1_05908.t1 | 1 | 1 | DDE_Tnp_4 | 182 | 348 | 1.3e-28 | 99.5 | 4.0e-32 | 2.0e-28 | 99.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3841.1_05908.t1 | gi|115953196|ref|XP_785740.2| | PREDICTED: uncharacterized protein LOC580596 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_3841.1_05908.t1 | gi|72145861|ref|XP_795502.1| | PREDICTED: uncharacterized protein LOC590821 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_3841.1_05908.t1 | gi|115617904|ref|XP_001201283.1| | PREDICTED: uncharacterized protein LOC764781 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_3841.1_05908.t1 | gi|115629193|ref|XP_001201331.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_3841.1_05908.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3841.1_05908.t1 atgggagttaaaggaggagagatggatccaaaggatgaagaagatacagaattggctattctgtcatttgcctatttatt ggaacgtaggaaacagcaacaggagggaggacaggacaggatagaaaacagaaggaggctgcaatttggccattattccc aacttcttaatggagtattcaaacgtgaagatgttccttcttacatgaactatgtaaggattcctccggatctatttgat gaaatcctagaaagaataacgccaattgtcaagaggcaaagtaagaggagagaacacttggcatgcggtttgaagttggc cctgaccctcagacatctggccacaggtgataattatccctctttatcctatgccttcagatgcagtcgttcctctatat gccatttccttccagaggtttgcaaggccatcgtgagaacatataaagatgaggttatctcttgtcctgtgacccctgta gaatggaaagctatttcagagaaatttgagaagcaatggaatgtaccgcatgcgatcggggccttagacggaaagcatgt ggcaattcaaaagccagctcactcaggaagtctgttccataactacaaagggtttttctctatcccactcttggcactgg tagatgctgactacaagtttatctggattgaaatcggtggaatgggtcacatgtcagattcgcagatttttaaagatacc gagctgtttgaatgcttagaagaaggaaatctaggacttcctttgccatgccctttggtcggtggagacccagatctaaa cattccgtattttatacttggtgatgatgcctttgggcttcgaaaatatttaatgaaaccatatgcaaggaccgctatgc ctaaagaagatctcatttataactacagaatatcaaggggaaggcgtgtggtggaaaatgcgtttgggatattggcaaaa actttcagatgtctgcttgggacattggaacagaccccaggaacagttagggatataattgaggctgctgtggtactgca caatttgctcaggataaggtattcagttccaaataatgaggttgatcatgacgatgaggaccataatgtaatacctggac attggagagatgttataaactggcaagacgtcgacggacccgttgctgggaggaacagatctactacagacgcaaaaaca acaaagggaacagctaaagatgtacttcaactcaccaggtggagctgtgtcatggcaggataa |
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Protein
| Protein ID | pfu_aug2.0_3841.1_05908.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3841.1_05908.t1 MGVKGGEMDPKDEEDTELAILSFAYLLERRKQQQEGGQDRIENRRRLQFGHYSQLLNGVFKREDVPSYMNYVRIPPDLFD EILERITPIVKRQSKRREHLACGLKLALTLRHLATGDNYPSLSYAFRCSRSSICHFLPEVCKAIVRTYKDEVISCPVTPV EWKAISEKFEKQWNVPHAIGALDGKHVAIQKPAHSGSLFHNYKGFFSIPLLALVDADYKFIWIEIGGMGHMSDSQIFKDT ELFECLEEGNLGLPLPCPLVGGDPDLNIPYFILGDDAFGLRKYLMKPYARTAMPKEDLIYNYRISRGRRVVENAFGILAK TFRCLLGTLEQTPGTVRDIIEAAVVLHNLLRIRYSVPNNEVDHDDEDHNVIPGHWRDVINWQDVDGPVAGRNRSTTDAKT TKGTAKDVLQLTRWSCVMAG |
|