Gene
| Gene Model ID | pfu_aug2.0_3841.1_05909 |
|---|---|
| Locus | scaffold3841.1 : 8350 ... 12505 : - |
| To GenomeBrowser | scaffold3841.1:8350..12505 |
| Genes list of scaffold | scaffold3841.1 |
| Synonym | pfu_aug1.0_5630.1_09181 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3841.1_05909.t1 | 2 | 1 | MADF_DNA_bdg | 42 | 119 | 1.8e-06 | 28.0 | 7.5e-10 | 2.8e-06 | 27.4 |
| pfu_aug2.0_3841.1_05909.t1 | 2 | 2 | MADF_DNA_bdg | 256 | 269 | 1.8e-06 | 28.0 | 0.31 | 1200.0 | -0.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3841.1_05909.t1 | gi|676480474|ref|XP_009062071.1| | hypothetical protein LOTGIDRAFT_154610 [Lottia gigantea] | 1.0e-32 |
| pfu_aug2.0_3841.1_05909.t1 | gi|528495588|ref|XP_683419.4| | PREDICTED: uncharacterized protein LOC555734 isoform X1 [Danio rerio] | 2.0e-07 |
| pfu_aug2.0_3841.1_05909.t1 | gi|390345368|ref|XP_003726317.1| | 2.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_3841.1_05909.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3841.1_05909.t1 atgtggatccagaccgtcattctctgtcccaggaagatatttcacctggaccaacagtcgagaaaaaaagcaaaagtagt aagggcaactacgtcctttacggataaagaaaaagaggaaataatcgatttcttgaaagtgaatccctccatttacgaaa agcgaagagccgattacaaaaacacacaggcaaaggaaattttatggcaagaaaaggctgattcgatgggaacatctgtc aatgagttgaaaacatggtataatagccagaggacgaggatgggcaggctaaagcagttgataagaaaatctggacaagg agccgaagaatgggtgtggaacagtttccagtttttgttgccacatattgtggaaaatgaaaggaggaatgtcgtaagtt ttaagtcaaaaatacgtaatgccacagagtcctctaacgatgagtgtcaactatccagcaatccagaaggggatgcaacc tcccttgacacatcctcatcagttccttcgatgccagctacataaactttgctgaaagagtttctgaccaggaaaacatc agattatgtatccccctccagtggaaactactttgcgctatatgtcgaaaatacgctcaagaaactaccgggagcactga ggagggaagccgagtttcgtattcagcaaattttgcatgacgttgaagacaaggcagagcagcaaaaccagtcactaagt caggacatgataaactggcagccacatcctaatcaaccgtcaacacagaatccaattatttggcatgcacaaaataaaca ttggacgacccagcaaagatatacaagtccagcaagtgcaagttcttttggaactagagtgatggagcaccaaacagatc cttcatcgatacagggcaggacttacacagacttgcaagtaatccagacaggccaaaaatctcaggcagatgcaaattca agctccttcaatccatcattcatcgagagaatgacaacatcagctcctttaagacctattggagaggatgggatgtacca agcaactttgaacttaccaactgtggcaaaggcgtctgaaattcccagagaacttgaagctgatcaccagtaa |
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Protein
| Protein ID | pfu_aug2.0_3841.1_05909.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3841.1_05909.t1 MWIQTVILCPRKIFHLDQQSRKKAKVVRATTSFTDKEKEEIIDFLKVNPSIYEKRRADYKNTQAKEILWQEKADSMGTSV NELKTWYNSQRTRMGRLKQLIRKSGQGAEEWVWNSFQFLLPHIVENERRNVVSFKSKIRNATESSNDECQLSSNPEGDAT SLDTSSSVPSMPATXTLLKEFLTRKTSDYVSPSSGNYFALYVENTLKKLPGALRREAEFRIQQILHDVEDKAEQQNQSLS QDMINWQPHPNQPSTQNPIIWHAQNKHWTTQQRYTSPASASSFGTRVMEHQTDPSSIQGRTYTDLQVIQTGQKSQADANS SSFNPSFIERMTTSAPLRPIGEDGMYQATLNLPTVAKASEIPRELEADHQ |
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