Gene
| Gene Model ID | pfu_aug2.0_3841.1_05911 |
|---|---|
| Locus | scaffold3841.1 : 39442 ... 42995 : - |
| To GenomeBrowser | scaffold3841.1:39442..42995 |
| Genes list of scaffold | scaffold3841.1 |
| Synonym | pfu_aug1.0_11374.1_03065 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tripartite motif-containing protein 2-like | GO:0005488 GO:0005622 GO:0044260 GO:0044699 GO:0050794 GO:0060255 GO:0090304 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3841.1_05911.t1 | 2 | 1 | zf-B_box | 16 | 58 | 4.5e-14 | 52.0 | 1.5e-07 | 0.00025 | 20.8 |
| pfu_aug2.0_3841.1_05911.t1 | 2 | 2 | zf-B_box | 75 | 112 | 4.5e-14 | 52.0 | 1.9e-12 | 3.1e-09 | 36.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3841.1_05911.t1 | gi|291225545|ref|XP_002732762.1| | PREDICTED: E3 ubiquitin-protein ligase TRIM71-like [Saccoglossus kowalevskii] | 4.0e-10 |
| pfu_aug2.0_3841.1_05911.t1 | gi|675862592|ref|XP_009016856.1| | hypothetical protein HELRODRAFT_111386 [Helobdella robusta] | 5.0e-10 |
Transcript
| Transcript ID | pfu_aug2.0_3841.1_05911.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3841.1_05911.t1 atgagtgacaacggagcctcggtgattccaccccagacatttgtggaatgtggccaatgtaaagcacacgtcaacatatc atggttttgtaaaaactgtccatgctcactttgtgacacatgtgctaccgcccacaagacagtccatcaatacaaatccc atacagtcgttccacgaacatacaccgttctccgattgtacggtccggcaaaattagcagaacagtgtcacatccatcca gaaaaagaaatatcatcctactgcaatgattgcggcattccatgctgtgtctcgtgtatggtgaacgatcataaacgtca cgacttctctaccatagaagacaagtacctggatgcagaaagaggcctgaatgagtactacagacagcttgacaccgaca tcagaccaacgcttgaaaagatggaggaacaagctagagcggatgtcaaggaagatgacagccatgttgagaaagtcata aatgacattaacgatttccgtaaagatgtcgttcagaattttaatacagcatgtgatgatctcattgttaaggttcgttc gttttcaagtaaaacaaatgaagggttgaaagaaattgaaacctcactgaaaaatcttgaactcataaagaaagaaattg aagaaaaaatagcaaggggaaatttagacctaattaaatataaacctcccaaaatggatacacttgttcccaaactgaaa gatcaatcaaaggttgtcccaatttttgaaccttctaggaatttgtttgatttgatgaaaaaaccagttggaattattca gtcaaaagagatcaagaaagatgaaattaagagtagaaacgtcactagtatcagatctgtacaagtacaaaaaatgactt catttaagagtaagatagatgtcacatccctgaccacagcaggtaacaacatggcctgggttatgcatcttatgaatcct accataaatctgtatagcgataagggtgaggtagttaggtctgtgacagtggaaagcagtaagggtatcaatgacatgac catcacaaagtcaggggagatgatagtatcatgtgtagacacgaaagtgaggcgtgtatcagtgagtggtaatgtgtcta cactgatagacacggcaccatttggctgtaaaggtgtgtgtctgacgaacaaggaggagattgtagtgtgtttgagtggt cagagtgataagagtcacgtggctgtgtactcacctgataatcgtagtaagctacgtgagatacggggtaggggcggtaa ggggaagtaccttattactaatccttaccgtgtggtacagaatggccaggatatgtatgtagttaattttaaaaagaatg tggtatgtgtagatgagagagatgatgttaggtggttgtataacggtcaactgactaagctagaaaattcctttgatcca cattgtatatgtgttgatcagtacaagaacttgctggttactgatactgataaccactgtgtacattatatagacgggga aggaggactgatgcaggtgatactgacagtagaacaaataggattacggtgtcactgggggatctgtgtagatgacgtta caggttatgtctgggttggaaattctcctcgggatgttgtcattgctaaatacttagaataa |
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Protein
| Protein ID | pfu_aug2.0_3841.1_05911.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3841.1_05911.t1 MSDNGASVIPPQTFVECGQCKAHVNISWFCKNCPCSLCDTCATAHKTVHQYKSHTVVPRTYTVLRLYGPAKLAEQCHIHP EKEISSYCNDCGIPCCVSCMVNDHKRHDFSTIEDKYLDAERGLNEYYRQLDTDIRPTLEKMEEQARADVKEDDSHVEKVI NDINDFRKDVVQNFNTACDDLIVKVRSFSSKTNEGLKEIETSLKNLELIKKEIEEKIARGNLDLIKYKPPKMDTLVPKLK DQSKVVPIFEPSRNLFDLMKKPVGIIQSKEIKKDEIKSRNVTSIRSVQVQKMTSFKSKIDVTSLTTAGNNMAWVMHLMNP TINLYSDKGEVVRSVTVESSKGINDMTITKSGEMIVSCVDTKVRRVSVSGNVSTLIDTAPFGCKGVCLTNKEEIVVCLSG QSDKSHVAVYSPDNRSKLREIRGRGGKGKYLITNPYRVVQNGQDMYVVNFKKNVVCVDERDDVRWLYNGQLTKLENSFDP HCICVDQYKNLLVTDTDNHCVHYIDGEGGLMQVILTVEQIGLRCHWGICVDDVTGYVWVGNSPRDVVIAKYLE |
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