Gene
Gene Model ID | pfu_aug2.0_386.1_20699 |
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Locus | scaffold386.1 : 2483 ... 6095 : - |
To GenomeBrowser | scaffold386.1:2483..6095 |
Genes list of scaffold | scaffold386.1 |
Synonym | pfu_aug1.0_4931.1_30820 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_386.1_20699.t1 | 5 | 1 | Myc_N | 1 | 109 | 1.1e-23 | 83.9 | 2.4e-24 | 1.2e-20 | 73.9 |
pfu_aug2.0_386.1_20699.t1 | 5 | 2 | Myc_N | 107 | 136 | 1.1e-23 | 83.9 | 9.3e-08 | 0.00046 | 19.4 |
pfu_aug2.0_386.1_20699.t1 | 5 | 3 | Myc_N | 152 | 174 | 1.1e-23 | 83.9 | 1.4e-05 | 0.069 | 12.3 |
pfu_aug2.0_386.1_20699.t1 | 5 | 4 | Myc_N | 194 | 254 | 1.1e-23 | 83.9 | 0.12 | 600.0 | -0.7 |
pfu_aug2.0_386.1_20699.t1 | 5 | 5 | Myc_N | 268 | 305 | 1.1e-23 | 83.9 | 0.045 | 220.0 | 0.7 |
pfu_aug2.0_386.1_20699.t1 | 1 | 1 | HLH | 304 | 355 | 1.0e-11 | 44.3 | 4.4e-15 | 2.2e-11 | 43.2 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_386.1_20699.t1 | gi|657583122|ref|XP_008295653.1| | PREDICTED: N-myc proto-oncogene protein [Stegastes partitus] | 2.8026e-45 |
pfu_aug2.0_386.1_20699.t1 | gi|734622719|ref|XP_010739323.1| | PREDICTED: N-myc proto-oncogene protein [Larimichthys crocea] | 4.2039e-45 |
pfu_aug2.0_386.1_20699.t1 | gi|259013287|ref|NP_001158444.1| | myc proto-oncogene protein [Saccoglossus kowalevskii] | 1.96182e-44 |
pfu_aug2.0_386.1_20699.t1 | gi|573875363|ref|XP_006626008.1| | PREDICTED: N-myc proto-oncogene protein-like [Lepisosteus oculatus] | 5.04467e-44 |
pfu_aug2.0_386.1_20699.t1 | gi|551502273|ref|XP_005802681.1| | PREDICTED: N-myc proto-oncogene protein-like [Xiphophorus maculatus] | 2.00386e-43 |
Transcript
Transcript ID | pfu_aug2.0_386.1_20699.t1 |
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Definition | - |
>pfu_aug2.0_386.1_20699.t1 atggactacgatacatttcagccttgcttttatgaaaacgagacagagctgtcacctgtaggatcatatccaaatgaaga catgtggaagaagtttgagttgcttcccaccccacccctttccccacagagagatgaccagtttgattctaccctggatt tggagaacctcacactgccactgacagattacattctgaatgatgatgatgatgcctcgctatttgagaaaatgactttt ccggaatcacctccttcgcctagtttacattctaaattaattcaggattgtatgtggtcaggtgattctggacgttacaa gacaggagacaagctgtcaacatcactggatgtcaactcctcagattgtgtggatcctgcagctgtcttcccgtacccca tgcatagcatcactggttacatgagtgaaacgaagctacacaacctgggtactgaaacaccttctgattcagaagaggag attgatgttgtcactgttgaacgccaacaacaacaagttccagctgtatcaggcaaaaggaaagctactcttctcatcca aagtgttaaaactgaaccatcatccgaattgtcatctcccgctaaaacgacagttaccgtgaaagtgaaagtagacagac cactgcagcaaacggagcagccaaggagagttgagtgtccgactgatgtacataactattgtcaacccttcaaacgtgtt cgctcaatgccatcttcagcaagcagttcaccatcacattcaaaacgttttaaacgggaattaagtgtaccagaatttca taaacgtgtatcacagaaactacattcatcacatcgtatccgttcacactattgtagtagcaatacgtcaagtagaacat catcagactctgaagattgcccagagggcaagaggagtcaacacaatgacttggaacgtaaacgtagaaatgacctcaaa tttagtttctttgctctcagggatagtataccagacttaatgaaacaggaacgtgcgcctaaagttctcattcttaaaaa ggcatctgaacacatacgaaaactgggtcatgaagaacagagacttgtagaagataaggaaatgttgagtgcaaaacacg agcagttgttaaggactttagagcatctacgtgctagagaattttaa |
Protein
Protein ID | pfu_aug2.0_386.1_20699.t1 |
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Definition | - |
>pfu_aug2.0_386.1_20699.t1 MDYDTFQPCFYENETELSPVGSYPNEDMWKKFELLPTPPLSPQRDDQFDSTLDLENLTLPLTDYILNDDDDASLFEKMTF PESPPSPSLHSKLIQDCMWSGDSGRYKTGDKLSTSLDVNSSDCVDPAAVFPYPMHSITGYMSETKLHNLGTETPSDSEEE IDVVTVERQQQQVPAVSGKRKATLLIQSVKTEPSSELSSPAKTTVTVKVKVDRPLQQTEQPRRVECPTDVHNYCQPFKRV RSMPSSASSSPSHSKRFKRELSVPEFHKRVSQKLHSSHRIRSHYCSSNTSSRTSSDSEDCPEGKRSQHNDLERKRRNDLK FSFFALRDSIPDLMKQERAPKVLILKKASEHIRKLGHEEQRLVEDKEMLSAKHEQLLRTLEHLRAREF |