Gene
| Gene Model ID | pfu_aug2.0_386.1_20700 |
|---|---|
| Locus | scaffold386.1 : 72416 ... 75941 : + |
| To GenomeBrowser | scaffold386.1:72416..75941 |
| Genes list of scaffold | scaffold386.1 |
| Synonym | pfu_aug1.0_56110.1_48850 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_386.1_20700.t1 | 1 | 1 | PNK3P | 57 | 218 | 0.0 | 179.9 | 0.0 | 0.0 | 179.4 |
| pfu_aug2.0_386.1_20700.t1 | 2 | 1 | AAA_33 | 89 | 144 | 8.8e-25 | 87.2 | 0.21 | 340.0 | 1.0 |
| pfu_aug2.0_386.1_20700.t1 | 2 | 1 | Zeta_toxin | 248 | 288 | 8.8e-11 | 41.2 | 1.8e-07 | 0.0003 | 19.9 |
| pfu_aug2.0_386.1_20700.t1 | 2 | 2 | AAA_33 | 256 | 376 | 8.8e-25 | 87.2 | 3.6e-26 | 5.9e-23 | 81.3 |
| pfu_aug2.0_386.1_20700.t1 | 2 | 2 | Zeta_toxin | 296 | 366 | 8.8e-11 | 41.2 | 3.2e-07 | 0.00053 | 19.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_386.1_20700.t1 | gi|524879386|ref|XP_005096369.1| | PREDICTED: bifunctional polynucleotide phosphatase/kinase-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_386.1_20700.t1 | gi|676477545|ref|XP_009061143.1| | hypothetical protein LOTGIDRAFT_126696 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_386.1_20700.t1 | gi|585709313|ref|XP_006824329.1| | PREDICTED: bifunctional polynucleotide phosphatase/kinase-like, partial [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_386.1_20700.t1 | gi|72139831|ref|XP_791366.1| | PREDICTED: bifunctional polynucleotide phosphatase/kinase [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_386.1_20700.t1 | gi|291242191|ref|XP_002740993.1| | PREDICTED: uncharacterized protein F21D5.5-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_386.1_20700.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_386.1_20700.t1 atgggtagacctaaaaggaaagctgctgaccaagccgctgtcaaagcgaaaagagcgaaaggcgaaactgacctcagcga tggactgaagtggtcacagcacggcgatgtgataaagggggcgtgtcccctgatggcgctcacatcggatactctgaaag gatgctcaaaagtttttggttttgacattgatttcactgtcataaaaacagcaagcgggagaaagtttgcaacgggagca tcagattgggagtggtgggacgatgtggtacctcagaagttacgagatctccatggtgacggttaccgggttatcttctt taccaatcaggctggcatagaaaagctcaaagttaaaccagaggagataatgaagaaagtggaggacatgatcgcagagc tcggaatccctgtcttgtgttatgtatgtacaggagaaaatcactacagaaaacccagcacctacatgtgggatttcttt gttaagaacaacaatcaaggagtaaaggttgacctgtcaaaaagcacgtatgtgggtgatgcagcaggacgggccaagga atgggcccccggcaagccaaaggatttctcttgtagtgataggaagtttgcagctaacattggattaaattttgctactc ctgaagaattctttcttggagagacagccgctccctttgaatggggttcatctgatcctaatacttacgttaaaggagag aaaaaaggtggaaataaggaaacttaccatagcaagggtcaagagatggtattgatggtggggccaccagcctctgggaa gagcacattcaggaagcggttcttggaaccacatggttatgtggcagtcaacagagacaccatgggtactgtggaaaaat gcgtcaaggcagccaaagaagcacttagtgaggggaaaagtgtagtggcagataacaccaatccacaagctgatgctcgt gcaaaatttgttgaacttgctaaaaagaaaggtattccatgtcgatgttttgtaatgaagacgccccttgatctgtgtca ccatctgaactatgtaaggcagaatcagacaaatggaggagtgaggaggatcccagatgtgggttataacgtgtataaga aaaactatgtagccccaaccaaagctgaaggctacacagaaatacaggagatagactttgttcctcagtttgattcacaa agagaccggcatctatttacgcagtggacataa |
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Protein
| Protein ID | pfu_aug2.0_386.1_20700.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_386.1_20700.t1 MGRPKRKAADQAAVKAKRAKGETDLSDGLKWSQHGDVIKGACPLMALTSDTLKGCSKVFGFDIDFTVIKTASGRKFATGA SDWEWWDDVVPQKLRDLHGDGYRVIFFTNQAGIEKLKVKPEEIMKKVEDMIAELGIPVLCYVCTGENHYRKPSTYMWDFF VKNNNQGVKVDLSKSTYVGDAAGRAKEWAPGKPKDFSCSDRKFAANIGLNFATPEEFFLGETAAPFEWGSSDPNTYVKGE KKGGNKETYHSKGQEMVLMVGPPASGKSTFRKRFLEPHGYVAVNRDTMGTVEKCVKAAKEALSEGKSVVADNTNPQADAR AKFVELAKKKGIPCRCFVMKTPLDLCHHLNYVRQNQTNGGVRRIPDVGYNVYKKNYVAPTKAEGYTEIQEIDFVPQFDSQ RDRHLFTQWT |
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