Gene
| Gene Model ID | pfu_aug2.0_386.1_20702 |
|---|---|
| Locus | scaffold386.1 : 92440 ... 100035 : - |
| To GenomeBrowser | scaffold386.1:92440..100035 |
| Genes list of scaffold | scaffold386.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_386.1_20702.t1 | 1 | 1 | DUF829 | 42 | 281 | 0.0 | 178.0 | 0.0 | 0.0 | 177.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_386.1_20702.t1 | gi|632963724|ref|XP_007898045.1| | PREDICTED: transmembrane protein 53 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_386.1_20702.t1 | gi|676421050|ref|XP_009043768.1| | hypothetical protein LOTGIDRAFT_75744, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_386.1_20702.t1 | gi|478431043|ref|NP_001264509.1| | transmembrane protein 53 [Gallus gallus] | 0.0 |
| pfu_aug2.0_386.1_20702.t1 | gi|543719966|ref|XP_005501195.1| | PREDICTED: transmembrane protein 53-A-like [Columba livia] | 0.0 |
| pfu_aug2.0_386.1_20702.t1 | gi|573894091|ref|XP_006634796.1| | PREDICTED: transmembrane protein 53-like [Lepisosteus oculatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_386.1_20702.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_386.1_20702.t1 atgggccggttgcaaagagagacatctagagaaatattgctctatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggtggtcatcttgttaggatgggccggttgcaaagaga gacatctagaaaaatattgctctatttatgaagaaaggtgcattaccattcgttacattccaccaacagagataaccttt ttcaagccacactatctgacaaatatcgctagcaaagtcctggagttgataggggactacaacctcgaggagaatcctgt cttttttcacgtcttcagcaataatgggtgctacgtttactcagaaatcagcaagatactcacttcatcagagggaaata aatacaaaaacattcaagttcaaggagtcatcattgacagcgcaccaggtaaaaggcgagtcacgagggccgcctgggcg tttgctaatgcatctggaaagccaggtgttattaagtatttcatattcctgggaatgatcgtgtacctggtcttcatgag attttacctgtacaccatgtcaattttacgaggggtgtcaggaggtcctaaccctaacagggtgtatcaagacatcaagg atgacaagtcacgctggcctcaattattcatatactctgacaatgatcaagtcattcctccatctgatgtcaaagaggtc attacgtacagacgtgaccagttacatgtagatgtggaatcaacacactatgtcgattctgaacatgtcgctcacttcag acttgaccctaatgggtacgcattacgctgtaagcagtttataaggaaatgtacagggtttccgctatcggccagtcgtg gtgaggacgcattccgtgatgattacgcctctctgcactcgcgtaatgaccagtctgagtga |
|
Protein
| Protein ID | pfu_aug2.0_386.1_20702.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_386.1_20702.t1 MGRLQRETSREILLYXXXXXXXXXXXXXXXXXXXXXXXXXXVVILLGWAGCKERHLEKYCSIYEERCITIRYIPPTEITF FKPHYLTNIASKVLELIGDYNLEENPVFFHVFSNNGCYVYSEISKILTSSEGNKYKNIQVQGVIIDSAPGKRRVTRAAWA FANASGKPGVIKYFIFLGMIVYLVFMRFYLYTMSILRGVSGGPNPNRVYQDIKDDKSRWPQLFIYSDNDQVIPPSDVKEV ITYRRDQLHVDVESTHYVDSEHVAHFRLDPNGYALRCKQFIRKCTGFPLSASRGEDAFRDDYASLHSRNDQSE |
|