Gene
| Gene Model ID | pfu_aug2.0_386.1_20708 |
|---|---|
| Locus | scaffold386.1 : 223011 ... 238934 : - |
| To GenomeBrowser | scaffold386.1:223011..238934 |
| Genes list of scaffold | scaffold386.1 |
| Synonym | pfu_aug1.0_3510.1_08638 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_386.1_20708.t1 | 2 | 1 | DUF3546 | 50 | 163 | 1.4e-37 | 128.0 | 6.70003e-41 | 1.4e-37 | 128.0 |
| pfu_aug2.0_386.1_20708.t1 | 2 | 1 | ARS2 | 224 | 243 | 0.0 | 262.9 | 5.2 | 11000.0 | -3.7 |
| pfu_aug2.0_386.1_20708.t1 | 2 | 2 | ARS2 | 583 | 790 | 0.0 | 262.9 | 0.0 | 0.0 | 262.9 |
| pfu_aug2.0_386.1_20708.t1 | 2 | 2 | DUF3546 | 603 | 639 | 1.4e-37 | 128.0 | 0.83 | 1800.0 | -1.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_386.1_20708.t1 | gi|524889710|ref|XP_005101409.1| | PREDICTED: serrate RNA effector molecule homolog [Aplysia californica] | 0.0 |
| pfu_aug2.0_386.1_20708.t1 | gi|585679215|ref|XP_006819476.1| | PREDICTED: serrate RNA effector molecule homolog [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_386.1_20708.t1 | gi|746865655|ref|XP_011063860.1| | PREDICTED: serrate RNA effector molecule homolog isoform X6 [Acromyrmex echinatior] | 0.0 |
| pfu_aug2.0_386.1_20708.t1 | gi|746865647|ref|XP_011063855.1| | PREDICTED: serrate RNA effector molecule homolog isoform X2 [Acromyrmex echinatior] | 0.0 |
| pfu_aug2.0_386.1_20708.t1 | gi|751231375|ref|XP_011169242.1| | PREDICTED: serrate RNA effector molecule homolog isoform X2 [Solenopsis invicta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_386.1_20708.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_386.1_20708.t1 atgggaggaggaggatacgggggtcctatgcccccacctaactggcccccaggtggtcctgagatgagaggtggtggtcc atcccaaggagactttggtcaggatcagggcagggattcagatttcccgacccagccggcaatgttgacattcaagcagt ttctgggtcaacaggaagacaatatcagcgatcaagatgcaattaaaaaatataacgagtataaggaagaatttaaacgt caacagatcaatgagtttttcctagcacacaaggaagaggaatggtttaagaccaagtaccatccagaggagtgtagtaa gagacaagaggaggtaactgcagccctccagaaacgttgtaacgttttcttagatctgttggagtccggcagaatcgagt atgtcagcgtagactttgaaagaacagaagaccttgtcaagctacttgatgcagctgttataaagatggagggtggaaca gatgaagatctgagtgtactggaccaggtttcggaggaggataaggcagacggaagtcgtagccgtaacaactcggaatc tatttcagctgataaaagtcctgtcaaagagaaaagaagaaagagtagagaatctactgataaaaaacctgatgaaccat tgaagcttcctatatctgcagagcagaaagaattgatgaaaaaagctcaggaattctcaaagcaacagctcgagaaaaat ggcacagaggcaccagtacaaaagaaatctccgaagaaaggaaagaagaggcatcgtgataagacagagtacagttacga gagtggatcagaatctgagagtgtatcggggtcagactctgattcagagccagcaccccctggactggaggaaaatgctg gagccccgggggaggagggagaggaaggtaacagtcaagatgtgtcatcatcaactaaagagggcgagacacaaaaagtt aaaaaagaaatagaggagggtgaggaggaggatgatgatgatgaagatgaagacgatgataaagatgttgatactaaaga aaccaaggaagagaagattgaggagacaagctcatcaaaaccacgatgtttacataaaacctgctccatcttcctgagga acctagctcctaccataaccaaacaggaggtggaagctatgtgtaagcggtaccctggttttctgagagttgccctccag gatcctcagtctgagagacgattcttcagacggggatgggtgacgtttgaaagggaagtcaatatcaaagagatctgctg gaaccttaataatatcaggcttcgtgattgtgaactgggagcaacattgaacagagaacttaagcagcgtatacgacctg tcaacggaatatcagcacacaaacagatcttacgatctgacgtcaaactagcggcaaaaataatacagaatctggacaat aaatggggcatctgggaagagccggaagaagagaaaaaagataaaaccaaggagctaacattcagtctgatatccaggaa ccctgtacttaaaaacatcacagattatcttgttgaggaagggagttacgaagaggaagaattgctgggtgaatctatgg aagagaaggagaaagagaccaataacgaggtgacagtcgagagagatgaaggcatgatcaaggcattagacagaatggtc ctgtacctgaggattgtccactctgtagattattatagtgctaacgagtaccctaacgaagacgagatgccgcataggtg tggtataatgcattgtagaggaataccacccaccacaaaaattacacaacaggatgtgaatgattggattgccaactttg agaacaaaatgaagcagttcacggaggccaaggacaaattagatgatgacgctgttgttaaactaggaaagaaagaccct gatgctgaagtggagaagtttgtgactgccaatacccaggaattatctaaagacaagtggctatgtcctataagtggcaa gaagttcaaaggtccagaatttgtgaggaagcacatctttaacaagcatgcagagaaagttgaagaagtcaaaacagagg tttctttctttaacaactatttaatggacccaaaaagaccctccctgccggaaaatcctaaaaataaacagcagcagaag ccggagagacacaaaggggatcacttctctggctctggggggatgggattccaaggtcaccaacagcaaggcatgatggg aggttacaatcaaccaagaccacacatgatgggatatagtggtggtcattatggatcccacggtggattcggtggtggac gtgattactaccctgagtataatagacgatcaggaggcgggtatcccagacatttcagatcttatgtgaagaggaactct gaccaccgtcgctctgatccgagaggtttgatcgagtacagagatctggacgcacctgatgatggagacatattttga |
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Protein
| Protein ID | pfu_aug2.0_386.1_20708.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_386.1_20708.t1 MGGGGYGGPMPPPNWPPGGPEMRGGGPSQGDFGQDQGRDSDFPTQPAMLTFKQFLGQQEDNISDQDAIKKYNEYKEEFKR QQINEFFLAHKEEEWFKTKYHPEECSKRQEEVTAALQKRCNVFLDLLESGRIEYVSVDFERTEDLVKLLDAAVIKMEGGT DEDLSVLDQVSEEDKADGSRSRNNSESISADKSPVKEKRRKSRESTDKKPDEPLKLPISAEQKELMKKAQEFSKQQLEKN GTEAPVQKKSPKKGKKRHRDKTEYSYESGSESESVSGSDSDSEPAPPGLEENAGAPGEEGEEGNSQDVSSSTKEGETQKV KKEIEEGEEEDDDDEDEDDDKDVDTKETKEEKIEETSSSKPRCLHKTCSIFLRNLAPTITKQEVEAMCKRYPGFLRVALQ DPQSERRFFRRGWVTFEREVNIKEICWNLNNIRLRDCELGATLNRELKQRIRPVNGISAHKQILRSDVKLAAKIIQNLDN KWGIWEEPEEEKKDKTKELTFSLISRNPVLKNITDYLVEEGSYEEEELLGESMEEKEKETNNEVTVERDEGMIKALDRMV LYLRIVHSVDYYSANEYPNEDEMPHRCGIMHCRGIPPTTKITQQDVNDWIANFENKMKQFTEAKDKLDDDAVVKLGKKDP DAEVEKFVTANTQELSKDKWLCPISGKKFKGPEFVRKHIFNKHAEKVEEVKTEVSFFNNYLMDPKRPSLPENPKNKQQQK PERHKGDHFSGSGGMGFQGHQQQGMMGGYNQPRPHMMGYSGGHYGSHGGFGGGRDYYPEYNRRSGGGYPRHFRSYVKRNS DHRRSDPRGLIEYRDLDAPDDGDIF |
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