Gene
| Gene Model ID | pfu_aug2.0_386.1_20709 |
|---|---|
| Locus | scaffold386.1 : 249761 ... 263434 : - |
| To GenomeBrowser | scaffold386.1:249761..263434 |
| Genes list of scaffold | scaffold386.1 |
| Synonym | pfu_aug1.0_3510.1_08639 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_386.1_20709.t1 | 2 | 1 | Steroid_dh | 33 | 49 | 3.0e-33 | 114.7 | 0.017 | 64.0 | 3.2 |
| pfu_aug2.0_386.1_20709.t1 | 2 | 2 | Steroid_dh | 159 | 312 | 3.0e-33 | 114.7 | 4.9e-36 | 1.8e-32 | 112.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_386.1_20709.t1 | gi|524902450|ref|XP_005107475.1| | PREDICTED: very-long-chain enoyl-CoA reductase-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_386.1_20709.t1 | gi|291224755|ref|XP_002732370.1| | PREDICTED: probable very-long-chain enoyl-CoA reductase art-1-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_386.1_20709.t1 | gi|676457849|ref|XP_009054784.1| | hypothetical protein LOTGIDRAFT_232335 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_386.1_20709.t1 | gi|260815739|ref|XP_002602630.1| | hypothetical protein BRAFLDRAFT_123019 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_386.1_20709.t1 | gi|115644432|ref|XP_781465.2| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_386.1_20709.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_386.1_20709.t1 atggatgcatgtgaggttgttgtcttgcatgccaaatcaggcaagagtttagcaaagctttcaaatttaacttcaaattc taccattcttgatgtaaaaagggagtaccataaacagtttccgaagtattatttatctagacaggcttttaaagtagatc caaagggtaaattgctgaaagaaaatgaaactctgaagagtcttgggctttcaaagtctcccaccctatacttcaaagat ttaggtccacaattgggatggactacaaagaaaactcaacactgtattccttacagagtacactggtcctttgttgattt acttaattttctacactcgcccagcaataatctacggtgtggctgctgcatcagaaccgagggcatctgtgtaaacattg cctgtgcctgtttttcattccattacgtcaagagattgttggagaccatttttgtacatagattttctaatgcaactatg ccagtaaggaacatattcaagaacagttcgtactactggggatttgcagcattcatcgcgtattacataaatcatcctct atacacagtgccagcttatggtgacatacagatttatggaggtcttgctggattcttgtttggagaactaggtaactttt ccatccacatggcactcagaaatctaagaccaccaggtacaaaggagaggcgtattccggttccgaccagcaacccaatg acaggtttatttagcctggtatcctgtcctaactacacgtacgaggcgatatcgtggatcagcttcagcatcatgactca gtgtttaccagctgctctgttcaccacgtgtggattttatcaaatggccgtatgggctctaggtaaacacagaaattaca aaaaggagttcaaggattacccaaggaaaaggaagagcattatacctttcttactgtaa |
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Protein
| Protein ID | pfu_aug2.0_386.1_20709.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_386.1_20709.t1 MDACEVVVLHAKSGKSLAKLSNLTSNSTILDVKREYHKQFPKYYLSRQAFKVDPKGKLLKENETLKSLGLSKSPTLYFKD LGPQLGWTTKKTQHCIPYRVHWSFVDLLNFLHSPSNNLRCGCCIRTEGICVNIACACFSFHYVKRLLETIFVHRFSNATM PVRNIFKNSSYYWGFAAFIAYYINHPLYTVPAYGDIQIYGGLAGFLFGELGNFSIHMALRNLRPPGTKERRIPVPTSNPM TGLFSLVSCPNYTYEAISWISFSIMTQCLPAALFTTCGFYQMAVWALGKHRNYKKEFKDYPRKRKSIIPFLL |
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