Gene
| Gene Model ID | pfu_aug2.0_386.1_20710 |
|---|---|
| Locus | scaffold386.1 : 266225 ... 270727 : + |
| To GenomeBrowser | scaffold386.1:266225..270727 |
| Genes list of scaffold | scaffold386.1 |
| Synonym | pfu_aug1.0_3510.1_08640 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_386.1_20710.t1 | 1 | 1 | Tctex-1 | 119 | 216 | 1.3e-20 | 73.1 | 1.3e-24 | 1.9e-20 | 72.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_386.1_20710.t1 | gi|524901322|ref|XP_005107071.1| | PREDICTED: tctex1 domain-containing protein 4-like [Aplysia californica] | 5.0e-35 |
| pfu_aug2.0_386.1_20710.t1 | gi|524901715|ref|XP_005107262.1| | PREDICTED: tctex1 domain-containing protein 1-like [Aplysia californica] | 5.0e-33 |
| pfu_aug2.0_386.1_20710.t1 | gi|676457842|ref|XP_009054782.1| | hypothetical protein LOTGIDRAFT_118384 [Lottia gigantea] | 2.0e-27 |
| pfu_aug2.0_386.1_20710.t1 | gi|676454775|ref|XP_009053791.1| | hypothetical protein LOTGIDRAFT_88271, partial [Lottia gigantea] | 5.0e-27 |
| pfu_aug2.0_386.1_20710.t1 | gi|524885279|ref|XP_005099248.1| | PREDICTED: tctex1 domain-containing protein 1-B-like [Aplysia californica] | 8.0e-26 |
Transcript
| Transcript ID | pfu_aug2.0_386.1_20710.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_386.1_20710.t1 atgttaactactcgtcatcacctagaaatgcagaggagcttatcgttaatccaaaagtccacagataaagactgttctaa acatgcctccataaacacgtcagaaggacgaacggacaaacacgagtctccgcgaagacgtaacacaatggaaagtccgc ctgtgttacagcgaacgccaaccaatgtttcaagttcttctctggtgggactgatggcgtctaagcggctggcgaggcgg ttaacatcaaagctgttctccggacggtccagcatgatgagttcatccagactctccgttcctgtccaaagagaaccgac atatcgcatggaacctcactcacgtgttcaaatagacaaggtcaagtctgttatagaatccgttctcgcggataatctga cgggaagttcttatggaatacacagtaagaccctatgtatccttctgggagaggaaataaaggagaaagtgaagaagtta cagtacgatcgttataaagtagtcacacatgtcctgattggagaactcaataaccaaggacttgaagtcgcgagccgatg tgtttgggataccgcgctcgacgattatgcctcgtgtaacttccgtaacaagaatctgttctgtactgcttccgtctata tggtgtaccatgaatga |
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Protein
| Protein ID | pfu_aug2.0_386.1_20710.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_386.1_20710.t1 MLTTRHHLEMQRSLSLIQKSTDKDCSKHASINTSEGRTDKHESPRRRNTMESPPVLQRTPTNVSSSSLVGLMASKRLARR LTSKLFSGRSSMMSSSRLSVPVQREPTYRMEPHSRVQIDKVKSVIESVLADNLTGSSYGIHSKTLCILLGEEIKEKVKKL QYDRYKVVTHVLIGELNNQGLEVASRCVWDTALDDYASCNFRNKNLFCTASVYMVYHE |
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