Gene
| Gene Model ID | pfu_aug2.0_386.1_20713 |
|---|---|
| Locus | scaffold386.1 : 296656 ... 306004 : - |
| To GenomeBrowser | scaffold386.1:296656..306004 |
| Genes list of scaffold | scaffold386.1 |
| Synonym | pfu_aug1.0_9790.1_02814 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_386.1_20713.t1 | 1 | 1 | Tctex-1 | 109 | 207 | 1.2e-23 | 82.8 | 2.4e-27 | 1.8e-23 | 82.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_386.1_20713.t1 | gi|72048298|ref|XP_784517.1| | PREDICTED: tctex1 domain-containing protein 1-B [Strongylocentrotus purpuratus] | 4.0e-28 |
| pfu_aug2.0_386.1_20713.t1 | gi|52219094|ref|NP_001004623.1| | tctex1 domain-containing protein 1 [Danio rerio] | 9.0e-28 |
Transcript
| Transcript ID | pfu_aug2.0_386.1_20713.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_386.1_20713.t1 atgtcattccagtcagctaagttgaagccagtgcctccggaggccgataatgacaagaaatcagtcataggagaaggaga gcgcaaaggcagtatcagcgaaaagcgcaagatgagcgtctcacagaaaaaaccgacggggcccatcaaccccaaaaata tccagtccgttacggggtcatctttggctggatttatggccaccaaaagatttatcaaaagattttctcagaaaaatcgc gacagatctgcctcctctgtgaatctgccgcccaaggagatggaaccgacgtacagaatggcgcccaagaaaaggttcaa cgtgacagacgtggaagatctcctaaagcgcaccgtggattctaaattcatagatatgcaataccacaggaagtatgctc ctacgatgacaagagtactctctaacgaaataaaggagaagctcaaagagttgaaatacgaacgctacaagtgggtgtgt gtagtgcaattgggggaagtgaaagaccaaggaatggtatctacaagcaggtgcgcgtgggacaaaaacaacgacaactt cgcttcctattattacaaaaacagatctatctatgtaaatgtgacagtatttggagtttatagggaataa |
|
Protein
| Protein ID | pfu_aug2.0_386.1_20713.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_386.1_20713.t1 MSFQSAKLKPVPPEADNDKKSVIGEGERKGSISEKRKMSVSQKKPTGPINPKNIQSVTGSSLAGFMATKRFIKRFSQKNR DRSASSVNLPPKEMEPTYRMAPKKRFNVTDVEDLLKRTVDSKFIDMQYHRKYAPTMTRVLSNEIKEKLKELKYERYKWVC VVQLGEVKDQGMVSTSRCAWDKNNDNFASYYYKNRSIYVNVTVFGVYRE |
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