Gene
| Gene Model ID | pfu_aug2.0_3862.1_09237 |
|---|---|
| Locus | scaffold3862.1 : 16896 ... 23001 : + |
| To GenomeBrowser | scaffold3862.1:16896..23001 |
| Genes list of scaffold | scaffold3862.1 |
| Synonym | pfu_aug1.0_32315.1_19449 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3862.1_09237.t1 | 1 | 1 | rve | 33 | 147 | 1.8e-12 | 47.4 | 2.4e-16 | 3.6e-12 | 46.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3862.1_09237.t1 | gi|542224179|ref|XP_005451484.1| | PREDICTED: uncharacterized protein LOC102082819 [Oreochromis niloticus] | 0.0 |
| pfu_aug2.0_3862.1_09237.t1 | gi|542259510|ref|XP_005464941.1| | PREDICTED: uncharacterized protein LOC102078014 isoform X1 [Oreochromis niloticus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_3862.1_09237.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3862.1_09237.t1 atgtccgacttaccagaagaccgttgcaaacctggtccacccttctcctttgtaggagtggacacctttggaccttggga gattgcgtttcgtcgtacaaggggtggcagtgcttgtcagaaacgatgggcactattgtttacgtgtcttgtcagcagag cgatccacatagaagttgtagaacagctctccagttcgtccttcataaacgcgctaagacgttttgtctccatgcgagga ccagtggttcaatttcgctctgacaggggaaccaattttgtcggcgcgtctgaagatcttgctatcgatgctcaatttat cgagaagggacctgtatccgattttctatcgagttcgcgtacaacatggatttttaaccctccatacgctccacacatgg gaggagcatgggagagacttatcgggacagtgaagcgcatactcaactctatgctattacaacacaaagggaaaacctta actcacgacgagcttgttactctcatgtccgagatatgtgcgattgtcaataacagaccactcgttgacgtgtcttgtga tcccgagtcaccagctatacttaccccatggaaaaccgagtacttgcaccggctgcaaggtcgtgctaagtggcaggaac agtctcgaaatctcaaagctggagatctggttttagtcaaagacattgactcattgcgcaatgactggccgattggtatg atagagaggacctttgagagtaaggatggtcttgtgagaaaggttgaggttgctgtagtgagagatggtaaacgtgtttt gtatgtgagaccagtaacagaacttgtaactcttttggaagtaaattga |
|
Protein
| Protein ID | pfu_aug2.0_3862.1_09237.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3862.1_09237.t1 MSDLPEDRCKPGPPFSFVGVDTFGPWEIAFRRTRGGSACQKRWALLFTCLVSRAIHIEVVEQLSSSSFINALRRFVSMRG PVVQFRSDRGTNFVGASEDLAIDAQFIEKGPVSDFLSSSRTTWIFNPPYAPHMGGAWERLIGTVKRILNSMLLQHKGKTL THDELVTLMSEICAIVNNRPLVDVSCDPESPAILTPWKTEYLHRLQGRAKWQEQSRNLKAGDLVLVKDIDSLRNDWPIGM IERTFESKDGLVRKVEVAVVRDGKRVLYVRPVTELVTLLEVN |
|