Gene
| Gene Model ID | pfu_aug2.0_388.1_27331 |
|---|---|
| Locus | scaffold388.1 : 144851 ... 157365 : - |
| To GenomeBrowser | scaffold388.1:144851..157365 |
| Genes list of scaffold | scaffold388.1 |
| Synonym | pfu_aug1.0_149550.1_71879 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_388.1_27331.t1 | 1 | 1 | FKBP_C | 209 | 293 | 5.0e-15 | 55.3 | 4.1e-18 | 8.6e-15 | 54.5 |
| pfu_aug2.0_388.1_27331.t1 | 2 | 1 | TPR_11 | 250 | 269 | 1.9e-12 | 46.6 | 2.7 | 5800.0 | -3.0 |
| pfu_aug2.0_388.1_27331.t1 | 2 | 2 | TPR_11 | 315 | 394 | 1.9e-12 | 46.6 | 2.9e-15 | 6.1e-12 | 45.0 |
| pfu_aug2.0_388.1_27331.t1 | 2 | 1 | TPR_1 | 319 | 342 | 8.7e-08 | 31.4 | 0.00014 | 0.3 | 10.7 |
| pfu_aug2.0_388.1_27331.t1 | 2 | 2 | TPR_1 | 364 | 396 | 8.7e-08 | 31.4 | 7.9e-07 | 0.0017 | 17.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_388.1_27331.t1 | gi|676479564|ref|XP_009061784.1| | hypothetical protein LOTGIDRAFT_127555 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_388.1_27331.t1 | gi|524910758|ref|XP_005110253.1| | PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP8-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_388.1_27331.t1 | gi|260813866|ref|XP_002601637.1| | hypothetical protein BRAFLDRAFT_85785 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_388.1_27331.t1 | gi|585647879|ref|XP_006814126.1| | PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP8-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_388.1_27331.t1 | gi|115898578|ref|XP_792687.2| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_388.1_27331.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_388.1_27331.t1 atgaattcaacggaggactcacagtatatacctgaagtatcaaaaacatctaatgatattgatcttaacctgaataatgc tgaaaaattcaatgataatgcacatgaggttcctcataatgataatattacaaaaagtcccaaatctgtgctgaatgaga gtgtgaataaagatgataatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnaaaggtgacaaggatgataatgatgataatgatagtgacagtgacatgccacctttagaggacagagttc cgaaagaagaaggaaatgactctgaaagtttaaatactgactctgaaaatcaaacaaaagagaaagtggacccagaaaca ttgaaggaaaatgatgtggaagatgaatgttataaacatgaagatactggaggtgatggtgaagaggaggaatacatgga tatactgggaaatggtctacttaaaagaaaggttctgaaagaaggagaaagtaaagcatcacgtccaatacatggagaca ttgcaacaataaaagtgtcgggaaaactggcagatgatacagctgtagatgtcattgactcggtcacatttactcttggt gatggtgatgttatacaagcctgggacctggcagtagctctgatgaatgtaggtcaagttatagaactaataacagatgc cagatacgcttatggtgaactgggcagagacccagacattcccggcaatgctactattacatacaccatagagctactta gtaaagattaccctaaagatttggataccatggctgtatcagaaagacttgaattaggagaaaagaaaagagagagaggg aactacctgttttctagacatgattatgttggtgctattaattcatattcaaaagctgtgaaaattctcgatcctgaatc tgtttcagattcagtagaaaacttacagcaactcctagaaaatagattaaagtgctacaataacatggcagcctgtcaac tcaagacaggaatatttgatgcagccaagacttcctgtaggtctgtgttagatgtacaaccagacaatgtgaaagctttg tttagaatgggaaaggtaatttcattcagcatattgagaacttttataattaatcaagagctatttaagttgacaaagaa gctaagtgcagaaacagagagtgaaaggaacatgtatcagaagatgttaggaaccaaagccactccgagcaaatcaccaa agaaagatgccaatacaaacaatagttgggtatggccgatgctaggagctgttgccataggtctagttggagcagggatt gcggcatatcgtcatatacagcactaa |
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Protein
| Protein ID | pfu_aug2.0_388.1_27331.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_388.1_27331.t1 MNSTEDSQYIPEVSKTSNDIDLNLNNAEKFNDNAHEVPHNDNITKSPKSVLNESVNKDDNXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGDKDDNDDNDSDSDMPPLEDRVPKEEGNDSESLNTDSENQTKEKVDPET LKENDVEDECYKHEDTGGDGEEEEYMDILGNGLLKRKVLKEGESKASRPIHGDIATIKVSGKLADDTAVDVIDSVTFTLG DGDVIQAWDLAVALMNVGQVIELITDARYAYGELGRDPDIPGNATITYTIELLSKDYPKDLDTMAVSERLELGEKKRERG NYLFSRHDYVGAINSYSKAVKILDPESVSDSVENLQQLLENRLKCYNNMAACQLKTGIFDAAKTSCRSVLDVQPDNVKAL FRMGKVISFSILRTFIINQELFKLTKKLSAETESERNMYQKMLGTKATPSKSPKKDANTNNSWVWPMLGAVAIGLVGAGI AAYRHIQH |
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