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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_388.1_27332
Locus scaffold388.1 : 167115 ... 183512 : +
To GenomeBrowser scaffold388.1:167115..183512
Genes list of scaffold scaffold388.1
Synonym pfu_aug1.0_3434.1_23321

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_388.1_27332.t1 8 1 FXa_inhibition 305 335 1.2e-07 31.7 0.002 3.7 7.7
pfu_aug2.0_388.1_27332.t1 8 1 EGF_CA 306 336 2.5e-08 33.7 0.0016 3.0 7.9
pfu_aug2.0_388.1_27332.t1 8 2 EGF_CA 346 374 2.5e-08 33.7 0.097 180.0 2.2
pfu_aug2.0_388.1_27332.t1 8 2 FXa_inhibition 353 381 1.2e-07 31.7 0.0024 4.4 7.5
pfu_aug2.0_388.1_27332.t1 8 3 FXa_inhibition 388 424 1.2e-07 31.7 4.6e-05 0.086 12.9
pfu_aug2.0_388.1_27332.t1 8 3 EGF_CA 390 423 2.5e-08 33.7 0.079 150.0 2.4
pfu_aug2.0_388.1_27332.t1 8 4 FXa_inhibition 429 467 1.2e-07 31.7 0.75 1400.0 -0.5
pfu_aug2.0_388.1_27332.t1 8 4 EGF_CA 434 465 2.5e-08 33.7 4.2 7800.0 -3.1
pfu_aug2.0_388.1_27332.t1 8 5 EGF_CA 477 506 2.5e-08 33.7 1.5 2700.0 -1.6
pfu_aug2.0_388.1_27332.t1 8 5 FXa_inhibition 478 510 1.2e-07 31.7 0.00054 1.0 9.5
pfu_aug2.0_388.1_27332.t1 8 6 EGF_CA 528 555 2.5e-08 33.7 5.6e-07 0.001 18.9
pfu_aug2.0_388.1_27332.t1 8 6 FXa_inhibition 529 555 1.2e-07 31.7 6.7e-05 0.12 12.4
pfu_aug2.0_388.1_27332.t1 8 7 EGF_CA 574 613 2.5e-08 33.7 1.8e-10 3.4e-07 30.1
pfu_aug2.0_388.1_27332.t1 8 7 FXa_inhibition 578 629 1.2e-07 31.7 8.9e-06 0.017 15.2
pfu_aug2.0_388.1_27332.t1 8 8 EGF_CA 623 659 2.5e-08 33.7 0.0066 12.0 5.9
pfu_aug2.0_388.1_27332.t1 8 8 FXa_inhibition 628 654 1.2e-07 31.7 0.14 260.0 1.8
pfu_aug2.0_388.1_27332.t1 11 1 TSP_3 658 693 0.0 236.8 0.0031 5.8 6.4
pfu_aug2.0_388.1_27332.t1 11 2 TSP_3 694 729 0.0 236.8 1.6e-15 2.9e-12 45.8
pfu_aug2.0_388.1_27332.t1 11 3 TSP_3 738 755 0.0 236.8 0.00022 0.41 10.1
pfu_aug2.0_388.1_27332.t1 11 4 TSP_3 756 791 0.0 236.8 6.2e-14 1.1e-10 40.7
pfu_aug2.0_388.1_27332.t1 11 5 TSP_3 793 814 0.0 236.8 2.5e-06 0.0046 16.3
pfu_aug2.0_388.1_27332.t1 11 6 TSP_3 816 852 0.0 236.8 1.3e-11 2.4e-08 33.3
pfu_aug2.0_388.1_27332.t1 11 7 TSP_3 854 877 0.0 236.8 3.0e-05 0.056 12.9
pfu_aug2.0_388.1_27332.t1 11 8 TSP_3 879 923 0.0 236.8 8.2e-08 0.00015 21.1
pfu_aug2.0_388.1_27332.t1 11 9 TSP_3 925 961 0.0 236.8 1.3e-11 2.4e-08 33.3
pfu_aug2.0_388.1_27332.t1 11 10 TSP_3 963 997 0.0 236.8 3.7e-13 6.8e-10 38.2
pfu_aug2.0_388.1_27332.t1 11 11 TSP_3 998 1032 0.0 236.8 6.9e-13 1.3e-09 37.3
pfu_aug2.0_388.1_27332.t1 1 1 TSP_C 1051 1251 0.0 334.9 0.0 0.0 334.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_388.1_27332.t1 gi|662193547|ref|XP_008469684.1| PREDICTED: cartilage oligomeric matrix protein, partial [Diaphorina citri] 0.0
pfu_aug2.0_388.1_27332.t1 gi|157117627|ref|XP_001658858.1| AAEL008062-PA, partial [Aedes aegypti] 0.0
pfu_aug2.0_388.1_27332.t1 gi|676457972|ref|XP_009054824.1| hypothetical protein LOTGIDRAFT_189289 [Lottia gigantea] 0.0
pfu_aug2.0_388.1_27332.t1 gi|524869977|ref|XP_005091776.1| PREDICTED: cartilage oligomeric matrix protein-like [Aplysia californica] 0.0

Transcript
Transcript IDpfu_aug2.0_388.1_27332.t1
Definition-
>pfu_aug2.0_388.1_27332.t1
atgaaacgattttcacaagttatagatatagttgcagacgatgaaattggaacgtctttcatattccaagatgaggtctt
cctgtcgggtgatttgccaattgccaagcgagaaggagacattgatgtattatttaggtccgagaatttggcactgggaa
ccaaatttattgtttacatgcagtattcgatggcgcaagtcattgtacaaatacgagcacgtgatcagagggagtacgag
ttgacattttcatgtcagctagacttaatgcgagggaaagatttgagaattttattacatttcaaagaactgcaagagcc
aacaaacagggctgatctgtatataaattgtaagaaagtagcaacagaagctagtgaaatcccactcagagagggaatcc
ttggtaaacagcaaattgtaaagaggattggttttgaattttatgacgatgcagagatcgatgatatgttggagatgcag
tcttgtaatcaagtaacagcctttgtcaatgtcgtcgtgccccctcccacagcacgacccagactgccagtccccacccc
taaaccaagagtatccgcccctccccctctccgacaggatagtaagacagtgacagaaccaatacccgaaccagaggact
cggatgacggtcggcggtatacctcacaaaataatcgacataggaacgacattcccaactctatccctacctcaggtagt
tatgacatgtattctgtagtccattctatcagagatttgacgtacgccgtcagaaagttacagagggaactccagttaca
gacgagtgaaacacggtatttgagagagaccttaggacaatgtgatatgtgcagtaatgcaagaacattcctgatgtcac
aacgaggtcgacaggataggttatttattcgctgtgcccagaatccatgtttcccaggagtgaaatgtcatgacacagcc
cgtgggtacagatgtgggcgttgtcctccaggctacctgggagatggtgttcgctgcgcggccagaataaagtgtgcaca
acgtccttgctttcctggtgttctatgcgaggatacaccctctggatataaatgtggcccgtgtcccccgggatcaacag
gcgacggaaccaagagagggtgccgagccttaaggattcaatgtaactccaatccatgcttcccaggcacccggtgtgag
gacactccctcgggatttagatgtggtgcgtgccccccaggaatgcagggtaatggtacaaagaacggatgttacattca
aagggagggatgcgacaagagtccatgttttccgggaacccgatgtaaagacactaccgctgggcacgtgtgtggtccat
gtccctttggaatgacaggaaacggcactaagaatggttgcgtttccatgaagactaggtgtgacagcagcccttgcttt
cctgacgtcacttgtacagatacgtttgacggctacatctgtggctcgtgtcccccggggatgacagggaatgggacggc
tgacggatgtatcggactgacttgtgatgacaatccgtgcttccccggatgtcgtgtttataatccatgcagcaacctga
gtatttgtatcaatacggaacccgggtacagatgtacggattgtccgaaaggttataccggtaatcatgttgttggagtc
ggcatagaaagcattaggaacatgttacaggtatgcaaggatgttgatgaatgtatgaatggagacaacggcggctgtgt
ggaacattcgtcctgcatcaacaccgtcggttcttttcggtgcggagaatgcgctgatggctacaccggaaaccagactg
tcggctgccggaaacttggtacgttatgtgcagatggaaccgaatgtagcagcaatgccagatgcgttattttaccaggc
atggacgccttcggatgccagtgcaagattggatatgctgggaacggattccaatgtggaaatgatacggacattgacgg
attaccagacataacgctatcctgtatcggctacaggtgcgtcaaggataactgtcctacagttcctaacagtggacaag
aagacgccgacaaggacgggctaggtgacgcctgtgatccagatatagataacgatggtatcgtcaatgatcccgacaat
tgtccatatgtttcaaaccccggacaagagaatacggaccttggggaagtggacaagtccggagacgcatgtgataactg
tccaactgtccccaacactgaccagacagacacagatggagatggaatgggtgatgtttgcgatcctgatatagataatg
atggtattttgaacgagaatgacaactgtgtgaaggttgctaacgctgaccaggtggacactgatggcgatggtgttggt
gaccgctgtgacaactgtcctcatgacaagaacgctggacaggacgacagtgacaacgatttgatcggcgacatttgtga
tacagatgctgacgatgatcaggatggtatacagaataacgtagataactgtgtgagggtacctaacgctgaccaagtgg
actccgaccaggatggcatcggtattttgaacgataatgacaactgtgtgaaggtggctaacgctgaccaggtggacagt
gatggtgatggtgtgggtgaccgctgtgataactgtcctcatgacaaaaacgctggacaggtggacactgatggcgatgg
tgttggtgaccgctgtgataactgtcctcatgacaagaacgctggacaggacgacagtgacaacgatttgatcggcgaca
tttgtgatacagatgctgacgatgatcaggatggtatacagaataacgtagataactgtgtgagggtacctaacgctgac
caagtggactccgaccaggatggcatcggtgacgtatgtgatgacgatgatgacgccgacggtgtgcttgacatcgtaga
taactgtcctctagcctacaacccacaacaagaggattacaacaatgacatgatcggagataaatgtgataacgacacgg
acggtgacgggtacgccgacatggaggacgtgtgtccagagaacgccgccattcattctactgacttccggaactttaga
acggtcgtgttagatcccgtgggagactctcagatagatccagattggcagatacaccatgacggagcggaaatcgtaca
ggttaagaacagtgatcctggactggcagtcaccgagcatgcgtttagtggagtggattttagcgggacattcttcgtga
attctgacgttgatgacgactacgcaggatttgtctttagttatcaggacagctctagtttttactgtgttatgtggaag
aagtctccccagacttactggcatcctactcccttccgtgcagtggcagaaccaggaatacaactcaaactgatcaagtc
agccacgggtccaggggagtatctccggaacgcactgtggcacacaggagatacagaaaacgaggtcaaactactatggc
aagacccacgtaatgagggatggaaagaaaagacagcgtacagatgggagttgatccacagacctaacatcggcttgata
agaattttggtatttgagaaaacaaagctgatagcagattccggtaacgtgtatgatgccaccctgcggggagggaaact
aggcgtgttctgtttctctcaggagatggtcatttggtcggacttagtatacagatgtaacgattacgtgccccggggta
tgctggaggaggggtcagagccgatggagccggccaacgccgtggtggaggattccggtatatttggactatttagatga

Protein
Protein IDpfu_aug2.0_388.1_27332.t1
Definition-
>pfu_aug2.0_388.1_27332.t1
MKRFSQVIDIVADDEIGTSFIFQDEVFLSGDLPIAKREGDIDVLFRSENLALGTKFIVYMQYSMAQVIVQIRARDQREYE
LTFSCQLDLMRGKDLRILLHFKELQEPTNRADLYINCKKVATEASEIPLREGILGKQQIVKRIGFEFYDDAEIDDMLEMQ
SCNQVTAFVNVVVPPPTARPRLPVPTPKPRVSAPPPLRQDSKTVTEPIPEPEDSDDGRRYTSQNNRHRNDIPNSIPTSGS
YDMYSVVHSIRDLTYAVRKLQRELQLQTSETRYLRETLGQCDMCSNARTFLMSQRGRQDRLFIRCAQNPCFPGVKCHDTA
RGYRCGRCPPGYLGDGVRCAARIKCAQRPCFPGVLCEDTPSGYKCGPCPPGSTGDGTKRGCRALRIQCNSNPCFPGTRCE
DTPSGFRCGACPPGMQGNGTKNGCYIQREGCDKSPCFPGTRCKDTTAGHVCGPCPFGMTGNGTKNGCVSMKTRCDSSPCF
PDVTCTDTFDGYICGSCPPGMTGNGTADGCIGLTCDDNPCFPGCRVYNPCSNLSICINTEPGYRCTDCPKGYTGNHVVGV
GIESIRNMLQVCKDVDECMNGDNGGCVEHSSCINTVGSFRCGECADGYTGNQTVGCRKLGTLCADGTECSSNARCVILPG
MDAFGCQCKIGYAGNGFQCGNDTDIDGLPDITLSCIGYRCVKDNCPTVPNSGQEDADKDGLGDACDPDIDNDGIVNDPDN
CPYVSNPGQENTDLGEVDKSGDACDNCPTVPNTDQTDTDGDGMGDVCDPDIDNDGILNENDNCVKVANADQVDTDGDGVG
DRCDNCPHDKNAGQDDSDNDLIGDICDTDADDDQDGIQNNVDNCVRVPNADQVDSDQDGIGILNDNDNCVKVANADQVDS
DGDGVGDRCDNCPHDKNAGQVDTDGDGVGDRCDNCPHDKNAGQDDSDNDLIGDICDTDADDDQDGIQNNVDNCVRVPNAD
QVDSDQDGIGDVCDDDDDADGVLDIVDNCPLAYNPQQEDYNNDMIGDKCDNDTDGDGYADMEDVCPENAAIHSTDFRNFR
TVVLDPVGDSQIDPDWQIHHDGAEIVQVKNSDPGLAVTEHAFSGVDFSGTFFVNSDVDDDYAGFVFSYQDSSSFYCVMWK
KSPQTYWHPTPFRAVAEPGIQLKLIKSATGPGEYLRNALWHTGDTENEVKLLWQDPRNEGWKEKTAYRWELIHRPNIGLI
RILVFEKTKLIADSGNVYDATLRGGKLGVFCFSQEMVIWSDLVYRCNDYVPRGMLEEGSEPMEPANAVVEDSGIFGLFR

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