Gene
| Gene Model ID | pfu_aug2.0_388.1_27334 |
|---|---|
| Locus | scaffold388.1 : 210685 ... 234448 : + |
| To GenomeBrowser | scaffold388.1:210685..234448 |
| Genes list of scaffold | scaffold388.1 |
| Synonym | pfu_aug1.0_3434.1_23319 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_388.1_27334.t1 | 5 | 1 | Myosin_tail_1 | 73 | 261 | 3.1e-06 | 25.2 | 3.4 | 8400.0 | -6.0 |
| pfu_aug2.0_388.1_27334.t1 | 5 | 2 | Myosin_tail_1 | 214 | 375 | 3.1e-06 | 25.2 | 1.2e-09 | 3.1e-06 | 25.2 |
| pfu_aug2.0_388.1_27334.t1 | 5 | 3 | Myosin_tail_1 | 362 | 584 | 3.1e-06 | 25.2 | 0.0033 | 8.2 | 4.0 |
| pfu_aug2.0_388.1_27334.t1 | 5 | 4 | Myosin_tail_1 | 639 | 749 | 3.1e-06 | 25.2 | 0.00048 | 1.2 | 6.7 |
| pfu_aug2.0_388.1_27334.t1 | 5 | 5 | Myosin_tail_1 | 989 | 1046 | 3.1e-06 | 25.2 | 0.018 | 45.0 | 1.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_388.1_27334.t1 | gi|524870553|ref|XP_005092061.1| | PREDICTED: coiled-coil domain-containing protein 171-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_388.1_27334.t1 | gi|524870555|ref|XP_005092062.1| | PREDICTED: coiled-coil domain-containing protein 171-like isoform X3 [Aplysia californica] | 0.0 |
| pfu_aug2.0_388.1_27334.t1 | gi|524870551|ref|XP_005092060.1| | PREDICTED: coiled-coil domain-containing protein 171-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_388.1_27334.t1 | gi|676430580|ref|XP_009045973.1| | hypothetical protein LOTGIDRAFT_171529 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_388.1_27334.t1 | gi|641764855|ref|XP_008167508.1| | PREDICTED: coiled-coil domain-containing protein 171 isoform X3 [Chrysemys picta bellii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_388.1_27334.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_388.1_27334.t1 atggattctttgacaacaaagagttctgtagtggatgttgatatagaccagagaagtgaatctcagatgagtggtattga tagagagaaaggggaccaaacacctaaaccatacatgaaatcagatgataccatccatggagtgacaccagactggaaaa tgtctttctcccgttcccctggctcagaagatgttggtaaatatagattggagaacaaccaactaaggcttcaggtcaaa caacttaatatggaactacagtcagaacaagacaccatagcacaagtgagaagacgactgaacactgtggagaaggaccg actagaggctgccagtaaagctaatgctgagatagcagaactagagtcccaagtggcccgtctaagggctcaactagaaa aaggagaggcttctcgtcagaatctggagtttgaactgacaaaggctcgacgtgatgttaaccaacaacggcagtccact ctagagaaagaatcagtacttgctgataccaaagaacaactacaaagtaagtacattcagctgttaacctcgaaactgaa attactttatatcacaatggttcactgccagtgtgaggaaatatgtgatcatgatctagccaaaaagcagacagagtttg atcttattagagcagagagggacaaactggattctttggtacttcaacatgaaagtgccatttccgagttctctgaaaag atacagcagctagagggcgacagaaaaaatcagacagaaaatcttcgtcgaacactaacggaaattgaatatgccaagga gagagaagataggcttaagaaagatttagagatgtccttacaaagactgcgtagtgtagaggaaaatatagaggcagaga gggcagctcatctcgagacaaagttcaactctgagattattcaattgcgtgtacgtgacttagaaggagcattagaagta gaaaagtcagccaatgatgaggccaataaagccatagacagactgacaaagcaaatcaaagagctggaaacatcatacga ggaggagagaaagaatggaagggacctatcaattaaactggaaaaagttgaaagggaatattcgtcagtgaagagacagc tgacatcagaggtggacaacaagaaaaatgtgatcggtaatctgtcaaaggaactggaagtacaccagaaaaactttaat gaactcaaagaggagttgtctaaggctaaaaagaggcagatatacttagaggagacttatgggggtagcatgagggagct agagttattattagataacttccaggtggatccaaaggcgagcctcaagtcaagtacaggatcaagaggaaagaaagaaa gttccaaggcgccggcaccgtccgctgtactagaatctctgagaataacgttaatggagtataaaaaacgattagatgat acaacagaggagttgggtaaaatgaagaagacaagtgactctttacacaaagagatagatcaatgtaaagagatgatttg ggccaaggataaagcattggaggatgcacagaagaattacacacggacggcaaaagagttaaacagaatcagaagtgagt atggtgaattagagagcagtatgactaagctaaaactgaacctacagagtaccagtactaactctaataaagataggaag aggatccaggaactgtctgaggagataatgaaacttgtgaagaggcacaaggcagatgatgaggagaaaatggcatacct tcatggaatgtaccagagacttctagctggacgtgtcatggtgtcaaccaaggaccctggtgtccaacagtttacatggg ctgacttgacgagtctagtatatgaacagatgtgtcaattggtcactagtgtccaaaggtccgaggagaagataagacac ttagaggaggccttaagaaccaaggaggaatcggtggaggagatgcagaaatctcatgaggaccagctgaacaaactaac ggccttgaccaaagaacgggaattgtcatggcagaaacaaaaggaagagatagaggctcactactcacaacttctatctg aggtccagtcaaggtctaagaaaagtcaggcaatggctgatcaagcttgggagaagatacgtatgacaggatcagtacaa caaggactggaaaccgagtgtcatgatctccgcagtcagacactagaggcccagaggcagagtaaagctctactagccac ctgtagtctactggcaggtgccctgtatcctaccttctcacggcagaattacctgtctcagcagaggaagatgttagagg atcagataaacagctgggagttctgtagggagaggatggaattgctagtcggcacactgagctcggaaatgaaggcagtt gaagaacaaagacttaacgaaccgagtaagctggagaaaccagccaagagacatccattgttaacgtttaggataggggc tgtggcagtgattgccgctaacaggttacgatacttgggacgaggaaataataggttgtttgtgacttatgatgctggtg tgtcaaatcaaacgggtattgttgtgtgtacaggtggagttaaaccagtttccagagaattctcaggtattagggacgag acagatacagaatctgagcaaagggaaatccagatggcagcactgaaatggatgtccagctcagagttactgtctaccgt tatgtcttccatgtctgaccttctggaggtcatggatggtatcaaggagaaagataaagctagtccaggtgaatgcagag ctctggtgaatgcagccaggaattccttcactaagttagtggataaaatgtgtcggcactttgatggtacgtccggacag ccatcagtcagtaacagggatagaaactcactagcccggcagattaataggggattggccaaggtgtgcatgggtaaaac gcttgaacagaaaaggcagatggcacctgttcatgagcttctaggggcgttacagaaccacatccttgacttcactcagc gacttcactctgtagaggtggagaggagaaacctagtgttagaactcaaccaattaagggaggagtgtggggatttacca catagagaggaagtggctagactgcaagaggaactcaaccatatcagagatgcggtataa |
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Protein
| Protein ID | pfu_aug2.0_388.1_27334.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_388.1_27334.t1 MDSLTTKSSVVDVDIDQRSESQMSGIDREKGDQTPKPYMKSDDTIHGVTPDWKMSFSRSPGSEDVGKYRLENNQLRLQVK QLNMELQSEQDTIAQVRRRLNTVEKDRLEAASKANAEIAELESQVARLRAQLEKGEASRQNLEFELTKARRDVNQQRQST LEKESVLADTKEQLQSKYIQLLTSKLKLLYITMVHCQCEEICDHDLAKKQTEFDLIRAERDKLDSLVLQHESAISEFSEK IQQLEGDRKNQTENLRRTLTEIEYAKEREDRLKKDLEMSLQRLRSVEENIEAERAAHLETKFNSEIIQLRVRDLEGALEV EKSANDEANKAIDRLTKQIKELETSYEEERKNGRDLSIKLEKVEREYSSVKRQLTSEVDNKKNVIGNLSKELEVHQKNFN ELKEELSKAKKRQIYLEETYGGSMRELELLLDNFQVDPKASLKSSTGSRGKKESSKAPAPSAVLESLRITLMEYKKRLDD TTEELGKMKKTSDSLHKEIDQCKEMIWAKDKALEDAQKNYTRTAKELNRIRSEYGELESSMTKLKLNLQSTSTNSNKDRK RIQELSEEIMKLVKRHKADDEEKMAYLHGMYQRLLAGRVMVSTKDPGVQQFTWADLTSLVYEQMCQLVTSVQRSEEKIRH LEEALRTKEESVEEMQKSHEDQLNKLTALTKERELSWQKQKEEIEAHYSQLLSEVQSRSKKSQAMADQAWEKIRMTGSVQ QGLETECHDLRSQTLEAQRQSKALLATCSLLAGALYPTFSRQNYLSQQRKMLEDQINSWEFCRERMELLVGTLSSEMKAV EEQRLNEPSKLEKPAKRHPLLTFRIGAVAVIAANRLRYLGRGNNRLFVTYDAGVSNQTGIVVCTGGVKPVSREFSGIRDE TDTESEQREIQMAALKWMSSSELLSTVMSSMSDLLEVMDGIKEKDKASPGECRALVNAARNSFTKLVDKMCRHFDGTSGQ PSVSNRDRNSLARQINRGLAKVCMGKTLEQKRQMAPVHELLGALQNHILDFTQRLHSVEVERRNLVLELNQLREECGDLP HREEVARLQEELNHIRDAV |
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