Gene
| Gene Model ID | pfu_aug2.0_388.1_27336 |
|---|---|
| Locus | scaffold388.1 : 252109 ... 266004 : - |
| To GenomeBrowser | scaffold388.1:252109..266004 |
| Genes list of scaffold | scaffold388.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_388.1_27336.t1 | 2 | 1 | MIF4G_like_2 | 21 | 49 | 0.0 | 225.0 | 1.3 | 3700.0 | -3.2 |
| pfu_aug2.0_388.1_27336.t1 | 2 | 1 | MIF4G | 24 | 232 | 2.3e-23 | 82.7 | 2.9e-26 | 8.5e-23 | 80.8 |
| pfu_aug2.0_388.1_27336.t1 | 3 | 1 | MIF4G_like | 228 | 257 | 8.6e-35 | 119.9 | 1.5 | 4300.0 | -3.1 |
| pfu_aug2.0_388.1_27336.t1 | 3 | 2 | MIF4G_like | 296 | 330 | 8.6e-35 | 119.9 | 4.8e-06 | 0.014 | 14.8 |
| pfu_aug2.0_388.1_27336.t1 | 3 | 3 | MIF4G_like | 345 | 426 | 8.6e-35 | 119.9 | 2.2e-33 | 6.7e-30 | 103.9 |
| pfu_aug2.0_388.1_27336.t1 | 2 | 2 | MIF4G_like_2 | 440 | 694 | 0.0 | 225.0 | 0.0 | 0.0 | 225.0 |
| pfu_aug2.0_388.1_27336.t1 | 2 | 2 | MIF4G | 633 | 654 | 2.3e-23 | 82.7 | 0.21 | 610.0 | -0.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_388.1_27336.t1 | gi|676464453|ref|XP_009056927.1| | hypothetical protein LOTGIDRAFT_190753 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_388.1_27336.t1 | gi|694829883|ref|XP_009463030.1| | PREDICTED: nuclear cap-binding protein subunit 1-like [Nipponia nippon] | 0.0 |
| pfu_aug2.0_388.1_27336.t1 | gi|527246422|ref|XP_005141545.1| | PREDICTED: nuclear cap-binding protein subunit 1 [Melopsittacus undulatus] | 0.0 |
| pfu_aug2.0_388.1_27336.t1 | gi|148228517|ref|NP_001085472.1| | nuclear cap-binding protein subunit 1-B [Xenopus laevis] | 0.0 |
| pfu_aug2.0_388.1_27336.t1 | gi|696981743|ref|XP_009559483.1| | PREDICTED: nuclear cap-binding protein subunit 1 [Cuculus canorus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_388.1_27336.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_388.1_27336.t1 atgcaagcggggcattcatcgaggaaaaggagacgtcagtcagataacattgacattgaggagagattagaatccctaat tacaagagtaggagaaaaaagtacatcatcgttggagagtaatttggagggcctagccagtgttttggaagcagatcttc acaactacaaaacaaaaatattgagaattttgtgtaattgtgtggtgaagttaccagagaaaatggctgtgtatacaaca ttgataggactactgaatgccaagaattataattgtggaggggagtttgtagaaatgttggttagaaacctgaaggaagc actgaaaacaggggagtatgatcaggccagatttatggtgcggtttttagcagacctagtaaattgccatgtgattgtag cagggtctttattagcaatgtttgacaactttatagaagtcacactggaggataacattcctcaggtgcgatcagattgg tatgtgtacgctactttgagtgctctcccttgggttggtaaggagttgcatgagaaaaaggaggcagaatttaacaaatt attaatgactattgagagttatatcacaaagagaatgaagattcatgtacctgcattgagggtgtggtcatcagatacac cccacccacaggaggagtatttagactgcctgtgggcccagattaggaatctcaaaaacaacaaatggcaggagaagcag atattacgaccttacttggcgtttgacagtgttttatgtgaggctctccagcattcccttatacaggtcatccctccctc acataatgaagaaacaaagtatcctctcccaaaagttgttttccgtatgtttgattacacagatgtgccagagggtccag tattacctggaagtcattctatagagagatatcttattgaggaccaacttcatcaaattgttcattcaaacaacacagaa cgcaaagactgtgcagcaactctattaagttttccatcaaagaataagattccccttaattacatgatagttgagttggc tcaagcaactgaaatgttatatgaaagaattgacagtatgaacgtttcctgtttggaaagatttacaaactggttctcat accatttgagtaactttcagttccgctggagctgggatgattgggcagcatgtacacagatggacctggagctccccaag ccaaaatttgtacgggaagtcctgctaaaggccatgaggttatcatatcatcagagaatggtagagacagttcctgagag ttttgaggctcttatacctgagaaacctcagtccgagtttaagtacgagaaagagggtgctggctccatgccggggacga tggtagcacatcagctgatatctgccatcaagtcaaagtgtacacccgaggaagccatggttctccttaaagatttacct aatccactcagtgatgaagagagtgatcccacataccatccactacgtattgatgtatttgtctcagtgctccttcattt aggaaataaatcattcagccattcatttgctgccattgccaagtttcatcacattctcaagctcctggctgacacagagg aaggtcaaatctggttgttacgcacaatgtatgaagtgtggcatacacatcaacagatgatggtggtattaatagacaag ttgttgaagacccagatagtggaaccttcagctgtagctaattggctgttctccagtgaaatgcaaccagagttcaccaa gttttatgtatgggagataatgcacagtacaattaaaaagatgagtaaacaggtggataaactggccatggatgtagaag atgctaaagataaactggatgcagcaaaacgaaggcaagcagatgaggagatgatagaaaggatggaggaaagattagag tcggcacaaaaccaacaaaaacgattattccttatcattttccagagatttataatgattctgacagaccatcttgctcg atgtgagagtgaagggatagattataacacaccatggtataaatgggtcatagaaagactccagcaaatattcctcatgc accatgagttagtgtaccgttacatcagtacattagaaagcttgctgttcaccagtgacatagacttccacatactggag attttccagcagttctgtgcattacgatcatga |
|
Protein
| Protein ID | pfu_aug2.0_388.1_27336.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_388.1_27336.t1 MQAGHSSRKRRRQSDNIDIEERLESLITRVGEKSTSSLESNLEGLASVLEADLHNYKTKILRILCNCVVKLPEKMAVYTT LIGLLNAKNYNCGGEFVEMLVRNLKEALKTGEYDQARFMVRFLADLVNCHVIVAGSLLAMFDNFIEVTLEDNIPQVRSDW YVYATLSALPWVGKELHEKKEAEFNKLLMTIESYITKRMKIHVPALRVWSSDTPHPQEEYLDCLWAQIRNLKNNKWQEKQ ILRPYLAFDSVLCEALQHSLIQVIPPSHNEETKYPLPKVVFRMFDYTDVPEGPVLPGSHSIERYLIEDQLHQIVHSNNTE RKDCAATLLSFPSKNKIPLNYMIVELAQATEMLYERIDSMNVSCLERFTNWFSYHLSNFQFRWSWDDWAACTQMDLELPK PKFVREVLLKAMRLSYHQRMVETVPESFEALIPEKPQSEFKYEKEGAGSMPGTMVAHQLISAIKSKCTPEEAMVLLKDLP NPLSDEESDPTYHPLRIDVFVSVLLHLGNKSFSHSFAAIAKFHHILKLLADTEEGQIWLLRTMYEVWHTHQQMMVVLIDK LLKTQIVEPSAVANWLFSSEMQPEFTKFYVWEIMHSTIKKMSKQVDKLAMDVEDAKDKLDAAKRRQADEEMIERMEERLE SAQNQQKRLFLIIFQRFIMILTDHLARCESEGIDYNTPWYKWVIERLQQIFLMHHELVYRYISTLESLLFTSDIDFHILE IFQQFCALRS |
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