Gene
| Gene Model ID | pfu_aug2.0_3891.1_05920 |
|---|---|
| Locus | scaffold3891.1 : 33276 ... 34308 : + |
| To GenomeBrowser | scaffold3891.1:33276..34308 |
| Genes list of scaffold | scaffold3891.1 |
| Synonym | pfu_aug1.0_93888.1_28021 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3891.1_05920.t1 | 1 | 1 | RVT_1 | 9 | 132 | 1.3e-17 | 63.9 | 1.2e-21 | 1.8e-17 | 63.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3891.1_05920.t1 | gi|736217748|ref|XP_010779020.1| | PREDICTED: uncharacterized protein LOC104953734, partial [Notothenia coriiceps] | 0.0 |
| pfu_aug2.0_3891.1_05920.t1 | gi|641655736|ref|XP_008179705.1| | PREDICTED: uncharacterized protein LOC103308315 [Acyrthosiphon pisum] | 1.00053e-42 |
| pfu_aug2.0_3891.1_05920.t1 | gi|410910126|ref|XP_003968541.1| | 3.99931e-42 |
Transcript
| Transcript ID | pfu_aug2.0_3891.1_05920.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3891.1_05920.t1 atgaaaacagtagaagacgtcgacgtgaagctacaaggagcgaaagtatttagcactttggacgcgtcttcgggattttg gacaatagaacttgacgaggagagatctatgaaaactacttttaatacgccgttcggaaggtataagtacagaaggatgc ctttcgggataagttctgcaccggaagtgttccagaaacggatttccgaaatatttgacgacatggaaggttgcgaggcg atcatggatgatgtcctaatatggggagaaacgatagagcaacacaacaaaaggctacggatagtactagagagagtcag ggccgcaaacctgaaactgaataagcaaaaatgcaagatatctctcacggaagtgaaatacatgggccatataataggat ccgacggcttaaaaacagacccagataaaattgacgccattacctcaatgtcggagcaaaaagcaaaaaggaactgcagc gatttatgggcatggtaa |
|
Protein
| Protein ID | pfu_aug2.0_3891.1_05920.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3891.1_05920.t1 MKTVEDVDVKLQGAKVFSTLDASSGFWTIELDEERSMKTTFNTPFGRYKYRRMPFGISSAPEVFQKRISEIFDDMEGCEA IMDDVLIWGETIEQHNKRLRIVLERVRAANLKLNKQKCKISLTEVKYMGHIIGSDGLKTDPDKIDAITSMSEQKAKRNCS DLWAW |
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