Gene
| Gene Model ID | pfu_aug2.0_39.1_30040 |
|---|---|
| Locus | scaffold39.1 : 91656 ... 96015 : - |
| To GenomeBrowser | scaffold39.1:91656..96015 |
| Genes list of scaffold | scaffold39.1 |
| Synonym | pfu_aug1.0_31772.1_19417 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_39.1_30040.t1 | 1 | 1 | Arf | 8 | 138 | 3.0e-07 | 29.8 | 1.4e-10 | 3.4e-07 | 29.6 |
| pfu_aug2.0_39.1_30040.t1 | 1 | 1 | Ras | 16 | 176 | 0.0 | 167.3 | 0.0 | 0.0 | 167.0 |
| pfu_aug2.0_39.1_30040.t1 | 1 | 1 | Miro | 16 | 130 | 4.3e-19 | 69.1 | 2.6e-22 | 6.5e-19 | 68.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_39.1_30040.t1 | gi|291238986|ref|XP_002739406.1| | PREDICTED: GTP-binding protein Rit1-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_39.1_30040.t1 | gi|749747274|ref|XP_011135754.1| | PREDICTED: GTP-binding protein Rit2 isoform X1 [Harpegnathos saltator] | 0.0 |
| pfu_aug2.0_39.1_30040.t1 | gi|524900392|ref|XP_005106616.1| | PREDICTED: GTP-binding protein Rit2-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_39.1_30040.t1 | gi|571512736|ref|XP_006565912.1| | PREDICTED: GTP-binding protein Rit2 isoform X4 [Apis mellifera] | 0.0 |
| pfu_aug2.0_39.1_30040.t1 | gi|572314469|ref|XP_006622907.1| | PREDICTED: GTP-binding protein Rit2-like isoform X2 [Apis dorsata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_39.1_30040.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_39.1_30040.t1 atgtcaaacgaacaaagttctcagagaaggggaaacagaacttacaaaatagtgtgtctgggagacggaggggtcggcaa aagtgctttggtcatccagtttgtttttcatagatttctcgactatcatgacccaactattgaggactcatatcaggtac aggccagaattgatggagagccaggtatcctggacatactggacactgctggacagcctgagtttagtgccatgcgtgag cagtatatgaggcgtggtgatgggtttatactgtgttactccatcacagacagacggagttttgacgagctccttaccta ctataagctgatagaacgtgtaaggtgccatgatgacataccactgatgcttgtaggaaacaagtgtgacttgcaagata agcgccaggttccacaagaggagggtttagcattatcacgtcgattgaggtgtccattttacgagacttctgcagcatat agacaatgtgttgatgacgtttttcatggacttgtacgagaaatcagacaaaaagaaaaagaggccttactagataattc tgataagaaaagttcaaagaaaaaaggtgtacgaggatttctttcaaaagttttcaaatcaaaacgcaaatcaaataacg atacttga |
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Protein
| Protein ID | pfu_aug2.0_39.1_30040.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_39.1_30040.t1 MSNEQSSQRRGNRTYKIVCLGDGGVGKSALVIQFVFHRFLDYHDPTIEDSYQVQARIDGEPGILDILDTAGQPEFSAMRE QYMRRGDGFILCYSITDRRSFDELLTYYKLIERVRCHDDIPLMLVGNKCDLQDKRQVPQEEGLALSRRLRCPFYETSAAY RQCVDDVFHGLVREIRQKEKEALLDNSDKKSSKKKGVRGFLSKVFKSKRKSNNDT |
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