Gene
| Gene Model ID | pfu_aug2.0_39.1_30042 |
|---|---|
| Locus | scaffold39.1 : 111352 ... 116385 : - |
| To GenomeBrowser | scaffold39.1:111352..116385 |
| Genes list of scaffold | scaffold39.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_39.1_30042.t1 | 1 | 1 | KH_1 | 39 | 65 | 7.5e-07 | 28.7 | 3.2e-10 | 9.5e-07 | 28.3 |
| pfu_aug2.0_39.1_30042.t1 | 1 | 1 | KH_2 | 40 | 71 | 6.8e-06 | 25.5 | 2.6e-09 | 7.7e-06 | 25.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_39.1_30042.t1 | gi|585646339|ref|XP_006811714.1| | PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform X1 [Saccoglossus kowalevskii] | 2.0e-10 |
| pfu_aug2.0_39.1_30042.t1 | gi|585646343|ref|XP_006811715.1| | PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform X2 [Saccoglossus kowalevskii] | 2.0e-10 |
Transcript
| Transcript ID | pfu_aug2.0_39.1_30042.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_39.1_30042.t1 atggacgatagctacgataacgaaggcaacatgaagcgtccccatgatgaggagtatgatgatgatggtggtgagagtaa gagaaggaggagagacgggggacctaaagtagaactacgatttcttctcgctagcaagaatgctggagcgatcataggaa agggcggcagtaacatcaaacggctacgacaagatgtaagctcattacttattatattccgtaaaggcttcacatctgat tattctctataa |
|
Protein
| Protein ID | pfu_aug2.0_39.1_30042.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_39.1_30042.t1 MDDSYDNEGNMKRPHDEEYDDDGGESKRRRRDGGPKVELRFLLASKNAGAIIGKGGSNIKRLRQDVSSLLIIFRKGFTSD YSL |
|