Gene
| Gene Model ID | pfu_aug2.0_39.1_30046 |
|---|---|
| Locus | scaffold39.1 : 209770 ... 215018 : - |
| To GenomeBrowser | scaffold39.1:209770..215018 |
| Genes list of scaffold | scaffold39.1 |
| Synonym | pfu_aug1.0_2887.1_08482 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_39.1_30046.t1 | 1 | 1 | Det1 | 146 | 546 | 0.0 | 585.4 | 0.0 | 0.0 | 585.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_39.1_30046.t1 | gi|676464654|ref|XP_009056990.1| | hypothetical protein LOTGIDRAFT_121100 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_39.1_30046.t1 | gi|742157896|ref|XP_010882311.1| | PREDICTED: DET1 homolog [Esox lucius] | 0.0 |
| pfu_aug2.0_39.1_30046.t1 | gi|683911993|ref|XP_009088261.1| | PREDICTED: DET1 homolog [Serinus canaria] | 0.0 |
| pfu_aug2.0_39.1_30046.t1 | gi|701349897|ref|XP_009983230.1| | PREDICTED: DET1 homolog isoform X1 [Tauraco erythrolophus] | 0.0 |
| pfu_aug2.0_39.1_30046.t1 | gi|564249615|ref|XP_006263884.1| | PREDICTED: DET1 homolog [Alligator mississippiensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_39.1_30046.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_39.1_30046.t1 atgtcctctacatctacagtgtcggatctggatctaaagccacgaaggattcctaaccagaatattgtccaccgactaca tcaccgagagactcattccagtaaaccaggcacccacttacaccaatctagaaggttctacaccaacatcttccctaatt ttaccgccatcaacgtggagaaacctccatgttttctgcggaaattctcgccagatggacgtttcttcatagcattttct tcagatcagacttctattgaaatatatacatttcagggatcagcagcagcagaggaccttctccagaacgtacgagggga tgtctctgtgatgggggaggatccaaaaaccagaaacgcctgcaatagacttttcaaaaagttctttaaattacgacata ctactctagtggctaaaaatggggagcatctgaacagagagtgtagtttattcactgacaatggaaattatgtaatagta gggtcagccagctatgtaccggaagatccccaccctcatttctttgacatctacaagaacaatgagtctgtatcacctaa cacccgctcaccattggaggattactccttacacatcgtagatctagagactggaatgctgtgtgatacaaggcatttta aatgtgataagatatttctatctcacaaccagggtctgtatctatataaggataccttagctgttctctctgtacaacag cagctcatacacatttttcatgtgacctcctccggaacttttcttgatgttcgtagtatcggtaggttttgttatgagga cgaccagctctactttcatcaaggtttggacaatccctctgcacacaaaccgtactcagaaaagacaatcaactcactta aacacagactcatggtttatctatacaaaatggcaaaggcagaaggcacattgtatgctcttaggagattctaccagtac tttgatcagttcaaagttctcagaatgtggaaaatgcaactcttagatgaaaatcatctcctcataaaatatgccagtga ggaggttgtgaccctaaggatttccgaccccaattcccagccgtctttttttgtggtttacaatatggtgaccaccgatg tgctggctgtctttgaaaatacgtctgaccaacttcttgagctctttgaacatttctgtgatttattccgtaatgccact ttgcacaatgaagcccagttcccatgttccgcctcaagtaatatctatgccaggcagattcagcagaggtttaaaatcac aataataaatgccaagtttggagggcacacagaagcagtaaagcgtttactcgcccatctacctatatcgtcacagtctt acagtagcagtccttacttagacctggccctctttagttatgacgacaaatgggtatccatgatggagagacccaaagct tgtggagaccatcctataaggttctatgcacgtgactcaggattgctgaaattcaaaatctatgcaggaatgctgggaag gaaccctcctccactagcaagacgacttgtagcattcacatttcatcccagtgaaccttttgccatcagtgttcaaagga caaatgctgagtatgttgtaaactttcatatcagacattgtgtaaatagttga |
|
Protein
| Protein ID | pfu_aug2.0_39.1_30046.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_39.1_30046.t1 MSSTSTVSDLDLKPRRIPNQNIVHRLHHRETHSSKPGTHLHQSRRFYTNIFPNFTAINVEKPPCFLRKFSPDGRFFIAFS SDQTSIEIYTFQGSAAAEDLLQNVRGDVSVMGEDPKTRNACNRLFKKFFKLRHTTLVAKNGEHLNRECSLFTDNGNYVIV GSASYVPEDPHPHFFDIYKNNESVSPNTRSPLEDYSLHIVDLETGMLCDTRHFKCDKIFLSHNQGLYLYKDTLAVLSVQQ QLIHIFHVTSSGTFLDVRSIGRFCYEDDQLYFHQGLDNPSAHKPYSEKTINSLKHRLMVYLYKMAKAEGTLYALRRFYQY FDQFKVLRMWKMQLLDENHLLIKYASEEVVTLRISDPNSQPSFFVVYNMVTTDVLAVFENTSDQLLELFEHFCDLFRNAT LHNEAQFPCSASSNIYARQIQQRFKITIINAKFGGHTEAVKRLLAHLPISSQSYSSSPYLDLALFSYDDKWVSMMERPKA CGDHPIRFYARDSGLLKFKIYAGMLGRNPPPLARRLVAFTFHPSEPFAISVQRTNAEYVVNFHIRHCVNS |
|