Gene
| Gene Model ID | pfu_aug2.0_39.1_30050 |
|---|---|
| Locus | scaffold39.1 : 271170 ... 273668 : - |
| To GenomeBrowser | scaffold39.1:271170..273668 |
| Genes list of scaffold | scaffold39.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_39.1_30050.t1 | 3 | 1 | SBF | 48 | 222 | 3.8e-38 | 130.7 | 7.79963e-42 | 3.8e-38 | 130.7 |
| pfu_aug2.0_39.1_30050.t1 | 3 | 2 | SBF | 234 | 259 | 3.8e-38 | 130.7 | 0.38 | 1900.0 | -2.0 |
| pfu_aug2.0_39.1_30050.t1 | 3 | 3 | SBF | 274 | 309 | 3.8e-38 | 130.7 | 0.038 | 190.0 | 1.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_39.1_30050.t1 | gi|260829617|ref|XP_002609758.1| | hypothetical protein BRAFLDRAFT_78591 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_39.1_30050.t1 | gi|260824531|ref|XP_002607221.1| | hypothetical protein BRAFLDRAFT_67981 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_39.1_30050.t1 | gi|115933245|ref|XP_791578.2| | PREDICTED: ileal sodium/bile acid cotransporter-like [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_39.1_30050.t1 | gi|759128762|ref|XP_011361489.1| | PREDICTED: ileal sodium/bile acid cotransporter [Pteropus vampyrus] | 0.0 |
| pfu_aug2.0_39.1_30050.t1 | gi|586548722|ref|XP_006909438.1| | PREDICTED: ileal sodium/bile acid cotransporter [Pteropus alecto] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_39.1_30050.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_39.1_30050.t1 atggaactggaaatacctactagtatgttgaatggttctatgtttaatggatcttctaacaacacattcgacaacacaac gaccattggaggcataaaaggaccatcaactttaaaacttgcgtttgatgttgtaattaagcttgcgttgataataataa tgcttggaatgggatgcaccatagaactagactcactactgaaacaccttcgtagacctacgggaatattaataggaatg gcgtcccagtttcttgtcctaccattggttacatttggcttggcgcatgcgctgatgttaccggatgttgctgctctagg catgatggtggttgcttgttgtccgggtggatctacttcaaacatattttcgtattgggtggatggagatgtagcactca gcatatctatgacaacgttttcgacgatttttgcgtttggaatgatgccgcttaatatatggatatacagtagaagctgg gtgagcggatccttgtttatcccgtatatcaacatactgatatccctccttatgacgattacaccagctctagttggaat tctcataaattggaaaattcccaaaattgcaacactattggtgaagtgtggttcggtagctggtgcgttgtccgtactgt tgacacttgtgttactcagtgttctgtatccgtttatgtactttgcaccatggaacatttacattggggcgttcttacta ccgttctgtggttttgcttttggatatattgtatctctaatatttggaatgaagggacatcacaggcgaactgttgcctt agaaaccggtattcaaaacttccccctttgtatgacactaatggctatgactttcaaaagttctatattttcagaaattg cattgtttcctttattatatggggttacttgtataatctgcagtttggtgtttgctttgatctataaaatagttactcat ctctccaagaaaaaggaatccaagaacaatcagagagaccgcgaggtaactgtggaattcatcgatgacagtggaaagaa tagtcatcaaaagagttaa |
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Protein
| Protein ID | pfu_aug2.0_39.1_30050.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_39.1_30050.t1 MELEIPTSMLNGSMFNGSSNNTFDNTTTIGGIKGPSTLKLAFDVVIKLALIIIMLGMGCTIELDSLLKHLRRPTGILIGM ASQFLVLPLVTFGLAHALMLPDVAALGMMVVACCPGGSTSNIFSYWVDGDVALSISMTTFSTIFAFGMMPLNIWIYSRSW VSGSLFIPYINILISLLMTITPALVGILINWKIPKIATLLVKCGSVAGALSVLLTLVLLSVLYPFMYFAPWNIYIGAFLL PFCGFAFGYIVSLIFGMKGHHRRTVALETGIQNFPLCMTLMAMTFKSSIFSEIALFPLLYGVTCIICSLVFALIYKIVTH LSKKKESKNNQRDREVTVEFIDDSGKNSHQKS |
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