Gene
| Gene Model ID | pfu_aug2.0_39.1_30053 |
|---|---|
| Locus | scaffold39.1 : 311636 ... 329294 : - |
| To GenomeBrowser | scaffold39.1:311636..329294 |
| Genes list of scaffold | scaffold39.1 |
| Synonym | pfu_aug1.0_15953.1_25473 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_39.1_30053.t1 | 1 | 1 | Death | 901 | 976 | 1.1e-12 | 47.4 | 1.9e-15 | 5.7e-12 | 45.2 |
| pfu_aug2.0_39.1_30053.t1 | 2 | 1 | TIR_2 | 951 | 1002 | 4.2e-25 | 87.8 | 0.0022 | 6.6 | 6.9 |
| pfu_aug2.0_39.1_30053.t1 | 2 | 2 | TIR_2 | 1100 | 1193 | 4.2e-25 | 87.8 | 2.2e-25 | 6.4e-22 | 77.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_39.1_30053.t1 | gi|676445141|ref|XP_009050659.1| | hypothetical protein LOTGIDRAFT_142504, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_39.1_30053.t1 | gi|676445156|ref|XP_009050664.1| | hypothetical protein LOTGIDRAFT_142474, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_39.1_30053.t1 | gi|676439070|ref|XP_009048738.1| | hypothetical protein LOTGIDRAFT_157899 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_39.1_30053.t1 | gi|676421643|ref|XP_009043817.1| | hypothetical protein LOTGIDRAFT_102305 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_39.1_30053.t1 | gi|260826912|ref|XP_002608409.1| | hypothetical protein BRAFLDRAFT_127609 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_39.1_30053.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_39.1_30053.t1 atggacactctgataggacaatatgatttcctgaaggctacagaagatgatgaaaatgagtttgttgataagctgaatga cttaaacattgaccctgagggtttgactcagaaggagttactgactatcctccatgcatacaaaatcaaggtctgtgttg aggggttccccaagaggatgtcaccaggatattggatggcatttagagcactggaaacacttttgagcgctatcagcaca gaaacacccaatatttctgatgaagagaagaatagatctctatttgatctatatctgaccttgatgaggtcaggaccagg aaccacacactgtgaactgatggagaatattagtggagagatcaagggatttctacagaacctacgtggtgaagatttga aatcttgggccagtgctgttaaagaattgaagtatgttccagaggcagattgtgatatagatgaacaaacaacatattat aaatcaagcatcccagaccaactggctatagtagtgggaaaaaccagccatgtcactgaagtatgggaggaactgctatt gatggttaagacactgtgttgccatgacaatgtgtctcagttagaggaccttatacggaatctggatgatatagtgtatg atgtcgataacaaagtcctccaggctaaccccaagatgtttgagacatgggctccaatcgctgcagagattctgaacaag gctgagaacaatgtgaaagtattcactgtcatggcaaggcaatgtgataaaatggagagcacagctccacctcctaaacc aggatatgataccctttggattgctatactgaagggtttagtaagaatgccagtacataaaagcttgagagttgccaagt ccctgatctcaaattcagcatcaaaaaaccttaaaaagacatggaaatggaaggaacatgttgaagatgccaaagaaata atccagcagatcggagctatgccattccccattagtacagattccgattccgatgacggccatgattatagtgatgctgt agatgaatgtgaggaaatactggagaaactcgtcaaaaatctagaaaatgcaaagagatccgatgaagtgatgccttacc tagcagaagtatgcctgtctaagttagaggagcgtaattccatcactgctgaaatagcagataagtctgcagatctactc gatcttaaggctcacagagataaagtggagggttatttaaccaggtatctgcctctataccttgacgaggactacccgtg ggacaatcatgaccttaaatgtgccggtcaatccttccttatgaatgtcatcgagtcattcgataccagtaaagagatgt cagaggggatccacaaaatgctgatagagatactgatgtacacaatggatgagaaacatgaagtgacaagcttatctagt ggagattttagtatatttacctttgttttgttcagctgcgtccctgtctatatgaccaagcacagaggccaggacacggt ggctatgatcgaacctatgttgggacccatgttcaaagtgttgatcaacaacatggaagaggaggatttacataacattt tactgtctattacgtacagtatagcaatcagtgatccagagatactgacaccatacagccaggaaatcatggatttatac ctggaaaacagacaatcacaagtccttgtgttgatgcataccagctacaaacataccagggatgctacagtactggagga acatttcactcagctgatggaggtattcatggaggatcaagatacgtacaatgtacagatcatgttccttacagacatag ccaagtcacatccacagatcaggttccttacagacgtagccaagtcacatccacaggtaatacacagatatgtacagtgt acagatcctgttccttacagacgtagccaagtcacatccacagatacgtacagtgtacagatcatgttcctgacagacgt agccaagtcacatccacagctgtttgatgttggtaccattgatggtattatgacacatcactttaagaacggccagtcca gtatacccacggtgttgtttctggaggctctagctgtgaagaggcaggaactaatcaaaccatactttcctggtaaaata ctgaacaatccagcaatccccgtcatgatggctaaaagtattgcaaaaatagctgtgtccatgacggagaagtacaatga gtacaaggacactgtgttgaagtactttattgagacttttaagaaatcagctgaagccactcaagtaacggcaatggtga caggactgagggagatgtgtgcgttgtttgggttagacaccgtcaagccgtatagagatgtagtggaaaagaaaaaagag gagagtacggacacagttatccaagacgcggcatcaaccctactggatgttattgatggaagaagtttggcgaaggacat agacaagcttaacgttgctgtggcagggactaaagtggtagtgaagaaggtacagagaactgtcaacgagcatgacaagg agatcaaagagacgaaggcggggcttatagatgtcaatcaaagagttgatgttgtggaagaagacctagaggaaacaaaa ggaaaagtggaggaaatagacatgaagaccatgaccaatgcccctaaatggtccagagatgtcacaaagttgatgaatcc taaatctgatcatgattggaggttgttgtctagtcgccttggttacagtgctgatgacatcagaggttgggctacccaat cagatccctgcatggctatgctgagtgaatggtatgctactcataagacagttgaggccacacatggggtgttagtagct ttacaggagatgaacagggaagatgctgctgttattgtagaaaatgctatgaaggctgtgaatttgtcagtgaatttagg caaacctataatcccattattagtagagaagatgagctggcctcctaaaggttccatgggtcctatcttcagcgagtatc tttttattcgatttttccaacgacctggagaggagacgaaagacgacaggatttggccagttgccaagttccaagaactt ctcatgcagctcaactgttttaaggtcatgcctgatgaaacagctgtcacagatgaatacaagaattggtggattccagt ccttgaaaatatcgttattgagaagaaaaacactaaaacagctggagaaaataaagtgaccactactcacacagagactg acagtgtttctcctgatgtatttatatcttaccaatgggggaaacagaaggagatttctgtgctgtaccagaggctgaca gggctgggttatacatgctggatggatatacaccaaatggggggaggagactcactctatgataagattgatagaggaat tcggggatgtaaggtagtgttaacctccatcacacagaagtatgccctctctgccaactgtcgtagggaggtcagtctgg ctgatgccctgaagaaaccaatcattcctctactgatggagaaatctgattggccacctagtggaccaatgagcatggtt tttactcagcttctctttatcaacttctgtaaggatgagtcagttcagctgagatgggacggtccaaagtttgaggaatt acaacagaagcttcaccagcatataccacttgataatgatgaaggtctgaaacaggaagaaccacctgttactatggcaa cagttgcgaacggatcttctgataaaaaggagatgaagaacgatgaaaaaagtcaagataatgctagaattcacaatcaa cagtcgtcaacagagacaaaagatgttcctctgtccagtcaaggaaatgattctgcttctggaaaacctgtcatcaataa cgaccccgcttcatccagcaattctacaaatactactgctggaaataaagtcagttctgatactacaatgggaccagatc aaagaaaggataccgccaaaactaacgacaaggaacagaaaagcgcaaagaaatcttctacttgcagtattctttga |
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Protein
| Protein ID | pfu_aug2.0_39.1_30053.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_39.1_30053.t1 MDTLIGQYDFLKATEDDENEFVDKLNDLNIDPEGLTQKELLTILHAYKIKVCVEGFPKRMSPGYWMAFRALETLLSAIST ETPNISDEEKNRSLFDLYLTLMRSGPGTTHCELMENISGEIKGFLQNLRGEDLKSWASAVKELKYVPEADCDIDEQTTYY KSSIPDQLAIVVGKTSHVTEVWEELLLMVKTLCCHDNVSQLEDLIRNLDDIVYDVDNKVLQANPKMFETWAPIAAEILNK AENNVKVFTVMARQCDKMESTAPPPKPGYDTLWIAILKGLVRMPVHKSLRVAKSLISNSASKNLKKTWKWKEHVEDAKEI IQQIGAMPFPISTDSDSDDGHDYSDAVDECEEILEKLVKNLENAKRSDEVMPYLAEVCLSKLEERNSITAEIADKSADLL DLKAHRDKVEGYLTRYLPLYLDEDYPWDNHDLKCAGQSFLMNVIESFDTSKEMSEGIHKMLIEILMYTMDEKHEVTSLSS GDFSIFTFVLFSCVPVYMTKHRGQDTVAMIEPMLGPMFKVLINNMEEEDLHNILLSITYSIAISDPEILTPYSQEIMDLY LENRQSQVLVLMHTSYKHTRDATVLEEHFTQLMEVFMEDQDTYNVQIMFLTDIAKSHPQIRFLTDVAKSHPQVIHRYVQC TDPVPYRRSQVTSTDTYSVQIMFLTDVAKSHPQLFDVGTIDGIMTHHFKNGQSSIPTVLFLEALAVKRQELIKPYFPGKI LNNPAIPVMMAKSIAKIAVSMTEKYNEYKDTVLKYFIETFKKSAEATQVTAMVTGLREMCALFGLDTVKPYRDVVEKKKE ESTDTVIQDAASTLLDVIDGRSLAKDIDKLNVAVAGTKVVVKKVQRTVNEHDKEIKETKAGLIDVNQRVDVVEEDLEETK GKVEEIDMKTMTNAPKWSRDVTKLMNPKSDHDWRLLSSRLGYSADDIRGWATQSDPCMAMLSEWYATHKTVEATHGVLVA LQEMNREDAAVIVENAMKAVNLSVNLGKPIIPLLVEKMSWPPKGSMGPIFSEYLFIRFFQRPGEETKDDRIWPVAKFQEL LMQLNCFKVMPDETAVTDEYKNWWIPVLENIVIEKKNTKTAGENKVTTTHTETDSVSPDVFISYQWGKQKEISVLYQRLT GLGYTCWMDIHQMGGGDSLYDKIDRGIRGCKVVLTSITQKYALSANCRREVSLADALKKPIIPLLMEKSDWPPSGPMSMV FTQLLFINFCKDESVQLRWDGPKFEELQQKLHQHIPLDNDEGLKQEEPPVTMATVANGSSDKKEMKNDEKSQDNARIHNQ QSSTETKDVPLSSQGNDSASGKPVINNDPASSSNSTNTTAGNKVSSDTTMGPDQRKDTAKTNDKEQKSAKKSSTCSIL |
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