Gene
| Gene Model ID | pfu_aug2.0_39.1_30054 |
|---|---|
| Locus | scaffold39.1 : 331785 ... 385286 : + |
| To GenomeBrowser | scaffold39.1:331785..385286 |
| Genes list of scaffold | scaffold39.1 |
| Synonym | pfu_aug1.0_13467.1_39498 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_39.1_30054.t1 | 3 | 1 | TIR | 497 | 585 | 2.1e-07 | 30.4 | 0.22 | 820.0 | -0.7 |
| pfu_aug2.0_39.1_30054.t1 | 1 | 1 | Death | 580 | 655 | 1.8e-12 | 46.8 | 1.3e-15 | 4.8e-12 | 45.4 |
| pfu_aug2.0_39.1_30054.t1 | 2 | 1 | TIR_2 | 659 | 746 | 0.0 | 155.3 | 9.1e-25 | 3.4e-21 | 75.3 |
| pfu_aug2.0_39.1_30054.t1 | 3 | 2 | TIR | 667 | 726 | 2.1e-07 | 30.4 | 1.8e-06 | 0.0066 | 15.8 |
| pfu_aug2.0_39.1_30054.t1 | 2 | 2 | TIR_2 | 844 | 937 | 0.0 | 155.3 | 3.3e-25 | 1.2e-21 | 76.7 |
| pfu_aug2.0_39.1_30054.t1 | 3 | 3 | TIR | 844 | 918 | 2.1e-07 | 30.4 | 0.00018 | 0.66 | 9.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_39.1_30054.t1 | gi|524882962|ref|XP_005098116.1| | PREDICTED: uncharacterized protein LOC101850562 [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_39.1_30054.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_39.1_30054.t1 atgggccgcagtcttcgagacttttttgatgttgggaagaaaacaccggtggttgtcaaaatctggggaaggctgataga cctcctaaaggttgtatgtctacatcctaacgtcaatggaatgccagacactgttgatgcatgtttttatataatgagga atgttgatgataaagcagtggagaacaattcctcgatgtttgagacttgggcacccgtaggagcagagatcttggacaag atgaaggagaataaacatattaatgaagtcatggactggtttatttccgagatgagaattcatacaaagccggctaatgc taaggaatgtgcagccgccatgaacctcaaggaatgtgcagctgccatgaacctcaagaaaaatcgtgagttaatagcag gcttgctagaacgattttacccactgtttattgacgaagactacccatgggaagatggatggtctgaagatgccggcgac agatttatacaaaacgttctggaatcatatgacaatgccaaagaaatctctgatgatgcagttgcagcctttgagaagat attcaagtatgcatgtaaaccaggtttggagattatttccttcaaatcaggacggcttaatatgcatggaagcgtgctat atcgcatgcgttggtacatagacaagtttcaggatgctgaatcagtcaagagaattgctccacttctaccctgtatctta gagtgcatggcaagcctggaggagggtgatgatgaggagaacttgaagtcaagtgtggcagtaacgttatcacatatggc atctaactcagccgagagtctggccccatatctcaaccaactcatcgattggtacatcaaggaggttgacagtagcttgt caaatattatccagttatgctgcctccataacacggaagttttatcagagagatttgctgagctagttgaggtatttgta caagatactgacagctatgtgcttcatggtatgatgtttaaatcagtagctgaacaacaacctgatgtctttgatgaaaa gagtttcgcacttataatggaacatcactggatgcatgagcatgccaacactcaactgctactagcagcagataagcttg tggaggctcgcgcagacctaatggaaccctatcttgttgataaagtcctcaactgtaaaatcatcatgccggtaatggcc cactatgtcaccaaaataatcctgtgtgtggttgccaattttgaggaactcaaagagccagtggtagactacttcatcaa aacactgaagtcaagttctgatgatactcagatttatgctatgttaaatggtctgagaggatttgttggtctatatggtg ctgataatgttaagccgcacatcaaacttattactaagttcaaatcacaaggaggaaccgtgtatgttcaagattcagcc actaatcttattgatttcatggaaggaagaagcttggaaaaggtgtcaaaggatgtagagaagggtaaggaagatgtaga gaagttacagataggtctagctggtaccaagttggtggtcaggagggtcagtaaaatgaccatgaaacatgagaaagaaa tcaagaaaacaaaggagaagctggcagatgtagatcagaaagtagacgtagtaaaggaagatctagaggacactaaagtc aaagtggaggagatagacatgaagacaatgagcaatgcccctacttggtctagagatgtcacaaagttgatgaatcctaa atctgatcatgattggaggttgttgtctagtcgccttggttacagtgctgatgacatcagaggttgggctacccaatcag atccctgcatggctatgctgagtgaatggtatgctactcataagacagttgaggccacacatggggtgttagtagcttta caggagatgaacagggaagatgctgctgttattgtagaaaatgccatgaaggcttggggtcatcagaatgaggtcaagtt gatacagcgccacctggagagagcaggatataaatgttggatggacattggtcagatgggagggggagacaaactgtttg agaagatagacactgggattagagccgctaaaatcattatatgttgtgtaacagagaaatatgccaaatcaccaaactgt aacagagaggtgaatttgtcagtgaatttaggcaaacctataatcccattattagtagagaagatgagctggcctcctaa aggttccatgggtcctatcttcagcgagtatcttttcatccgatttttccaacgaccaggagaggagacaaaggatgata ggatttggccagtcgccaagttccaagaacttcttatgcagctcaactgtttcaaggtcatgccggacgaaacagctgtc acagatgaatacaaaaattggtggattccagtcgtggaagaaatagttatacagaagaaagatattaaggctggaggagg cagtaaagctcctgaagttacagctgagactgacagcggttctcctgatgtatttatatcttaccaatgggggaaacaga aggagatttctgtgctgtaccagatgctgacaggcctgggttatacatgctggatggatatacaccagatggggggagga gactcactctatgacaagattgatagaggaattcggggatgtaaggtagtgttaacctctatcacacaaaagtatgccct ctctgccaactgtcgtagagaggtcagtctggctgatgccctgaagaaaccaatcattcctctactgatggagaaatccg attggccacctagtggaccaatgagcatggtttttactcagcttctctttatcaacttctgtaaggatgagtcagttcag ctgagatgggacggtccaaagtttgaggaactacaacagaagcttcaccagcatgtaccacttgataatgatgaaggtct gaaacaggaagaaccacctgttaccatggcaacagttgctaacggatcttctgataaaaaggagatgaaaaaggaagaat cttcaaagcagactgaagaagacaagagtaattctgaagaaaagaaccaaactaaggaaaaaagtaaagataatccaaaa cagcagcctcaagatgaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaagaaccaaactaaggaaaaaagtaaagataatc caaaacagcagcctcaagatgaggaaaaaggagtccctcagtcccatcaagaatctaaaactcctccagtaaaacctgtg gagaatggtccccctacaaagaataccaataaagatagcacacctcccccaccacagaagtcaaatagtccacctccacc acagaagtcaaatagtccacctccaccacagaagtcaaatagtccacctccaccacagaagtcaaatagtccacctccac cacagaaacctaatacaccctctgagccaaagaaatcctctacatgtgtcttgctctaa |
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Protein
| Protein ID | pfu_aug2.0_39.1_30054.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_39.1_30054.t1 MGRSLRDFFDVGKKTPVVVKIWGRLIDLLKVVCLHPNVNGMPDTVDACFYIMRNVDDKAVENNSSMFETWAPVGAEILDK MKENKHINEVMDWFISEMRIHTKPANAKECAAAMNLKECAAAMNLKKNRELIAGLLERFYPLFIDEDYPWEDGWSEDAGD RFIQNVLESYDNAKEISDDAVAAFEKIFKYACKPGLEIISFKSGRLNMHGSVLYRMRWYIDKFQDAESVKRIAPLLPCIL ECMASLEEGDDEENLKSSVAVTLSHMASNSAESLAPYLNQLIDWYIKEVDSSLSNIIQLCCLHNTEVLSERFAELVEVFV QDTDSYVLHGMMFKSVAEQQPDVFDEKSFALIMEHHWMHEHANTQLLLAADKLVEARADLMEPYLVDKVLNCKIIMPVMA HYVTKIILCVVANFEELKEPVVDYFIKTLKSSSDDTQIYAMLNGLRGFVGLYGADNVKPHIKLITKFKSQGGTVYVQDSA TNLIDFMEGRSLEKVSKDVEKGKEDVEKLQIGLAGTKLVVRRVSKMTMKHEKEIKKTKEKLADVDQKVDVVKEDLEDTKV KVEEIDMKTMSNAPTWSRDVTKLMNPKSDHDWRLLSSRLGYSADDIRGWATQSDPCMAMLSEWYATHKTVEATHGVLVAL QEMNREDAAVIVENAMKAWGHQNEVKLIQRHLERAGYKCWMDIGQMGGGDKLFEKIDTGIRAAKIIICCVTEKYAKSPNC NREVNLSVNLGKPIIPLLVEKMSWPPKGSMGPIFSEYLFIRFFQRPGEETKDDRIWPVAKFQELLMQLNCFKVMPDETAV TDEYKNWWIPVVEEIVIQKKDIKAGGGSKAPEVTAETDSGSPDVFISYQWGKQKEISVLYQMLTGLGYTCWMDIHQMGGG DSLYDKIDRGIRGCKVVLTSITQKYALSANCRREVSLADALKKPIIPLLMEKSDWPPSGPMSMVFTQLLFINFCKDESVQ LRWDGPKFEELQQKLHQHVPLDNDEGLKQEEPPVTMATVANGSSDKKEMKKEESSKQTEEDKSNSEEKNQTKEKSKDNPK QQPQDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNQTKEKSKDNPKQQPQDEEKGVPQSHQESKTPPVKPV ENGPPTKNTNKDSTPPPPQKSNSPPPPQKSNSPPPPQKSNSPPPPQKSNSPPPPQKPNTPSEPKKSSTCVLL |
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