Gene
| Gene Model ID | pfu_aug2.0_39.1_30057 |
|---|---|
| Locus | scaffold39.1 : 418105 ... 430029 : + |
| To GenomeBrowser | scaffold39.1:418105..430029 |
| Genes list of scaffold | scaffold39.1 |
| Synonym | pfu_aug1.0_2625.1_30187 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_39.1_30057.t1 | 2 | 1 | MFS_1 | 114 | 289 | 1.1e-29 | 103.2 | 6.2e-25 | 4.6e-21 | 74.9 |
| pfu_aug2.0_39.1_30057.t1 | 2 | 2 | MFS_1 | 295 | 464 | 1.1e-29 | 103.2 | 1.4e-12 | 1.1e-08 | 34.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_39.1_30057.t1 | gi|530567680|ref|XP_005280352.1| | PREDICTED: MFS-type transporter SLC18B1 isoform X2 [Chrysemys picta bellii] | 0.0 |
| pfu_aug2.0_39.1_30057.t1 | gi|530567678|ref|XP_005280351.1| | PREDICTED: MFS-type transporter SLC18B1 isoform X1 [Chrysemys picta bellii] | 0.0 |
| pfu_aug2.0_39.1_30057.t1 | gi|507925830|ref|XP_004674176.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_39.1_30057.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_39.1_30057.t1 atggagtcttcagagaatcatgacatgaaataccaagacttttacataccatacgctgacgatactaccagtgtttctga ccaaacgtacgatgtcttacaactaaatacgaatggatccctacagtacataccctcagagacggattcctttaaaggcg gggcaccctttgcctccacggcagccttactgcaggtacaagagactcggatgtcagtgtcaattactacagtcaatgag gatgaaatgacattagatccctccacccagtcccctggctacaacttctcatttaaaacgactccaagggacaagaaatt tctattactggcgataggtctggtgaatctgtttgcagcgacaagcttctctctcctcggaccattttttcctcagaagg cggttgataaaggggcaagtcagacagtcgtgggtctaattttcggagtctttgaattcgtgtctttcatttcttcgccg gttttcggtaattatatatccagtatcggacctaggtttatgttcacatccgggatcatggtcagtggcgtatgtactgt cctgtttggtgttctaggcacgagtcccgagggctaccagtttgtgttgatgtgttttctgacccgggctatggatgccc tcggtacctcggcattagccacctccagttatgctgttttggccttcaccttccccagatatctggccactgtagtggga taccttgaaatgttcacgggagttggtatgatgctaggtcccgccatagggggcgctctctactccatcggtggttacgg catgccgttttacgttattggaagcgtccagttcctcagtggcgttgttggcgtattcgttatgccatcgtcaaacgtgc tattttccgaagttttttctttgagtccggtgcatgtaagtttggtgtttcttgtagccccggctctgtacgccatagta acacctttctggggctggctctcagatgccaaaaatctggtgttttcgttggtgattgtaggatgtataacatcaagttt agtatttatactgataggaccgtgtccatggctgttaccctatatacccagatctttatggacagtggtgatatccctgg taataatgggtatattttatggtccagccattatcccattattcaccgcactttttatgggagcaagatctctgggtatg ccagacaacgtagacacttacgggatagtatccggctacttcaacgcttgtttctcgttaggagcctttcttggtcccat atgtggtagtgcggtgatggaggccaccagctttggttactccgccaccatttgtgctggattgtttctcttttccggcc tgttaatcgggttgtacataatatttggaaaacaagggaagacaacagaagagaatgccgattattcatcatag |
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Protein
| Protein ID | pfu_aug2.0_39.1_30057.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_39.1_30057.t1 MESSENHDMKYQDFYIPYADDTTSVSDQTYDVLQLNTNGSLQYIPSETDSFKGGAPFASTAALLQVQETRMSVSITTVNE DEMTLDPSTQSPGYNFSFKTTPRDKKFLLLAIGLVNLFAATSFSLLGPFFPQKAVDKGASQTVVGLIFGVFEFVSFISSP VFGNYISSIGPRFMFTSGIMVSGVCTVLFGVLGTSPEGYQFVLMCFLTRAMDALGTSALATSSYAVLAFTFPRYLATVVG YLEMFTGVGMMLGPAIGGALYSIGGYGMPFYVIGSVQFLSGVVGVFVMPSSNVLFSEVFSLSPVHVSLVFLVAPALYAIV TPFWGWLSDAKNLVFSLVIVGCITSSLVFILIGPCPWLLPYIPRSLWTVVISLVIMGIFYGPAIIPLFTALFMGARSLGM PDNVDTYGIVSGYFNACFSLGAFLGPICGSAVMEATSFGYSATICAGLFLFSGLLIGLYIIFGKQGKTTEENADYSS |
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